Guide to the Human Genome
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Name: IQSEC2 Sequence: fasta or formatted (1488aa) NCBI GI: 162138911
Description:

IQ motif and Sec7 domain 2 isoform1

Referenced in:

Additional Interaction Domain Families

Other entries for this name:
alt prot [949aa] IQ motif and Sec7 domain 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         96           2
 C cysteine            1.1         16           3
 D aspartate           4.4         65           2
 E glutamate           6.7         99           4
 F phenylalanine       2.8         42           1
 G glycine             9.1        136           3
 H histidine           4.3         64           9
 I isoleucine          2.8         41           2
 K lysine              3.6         53           3
 L leucine             8.0        119           2
 M methionine          1.7         25           2
 N asparagine          2.9         43           2
 P proline            11.8        175           9
 Q glutamine           5.6         84           3
 R arginine            8.3        123           3
 S serine             10.6        158           4
 T threonine           3.3         49           2
 V valine              4.0         60           2
 W tryptophan          0.2          3           1
 Y tyrosine            2.5         37           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   IQ motif and Sec7 domain 2 isoform1 
IQSEC2                0.591   IQ motif and Sec7 domain 2 isoform 2 
IQSEC1                0.348   IQ motif and Sec7 domain 1 isoform a 
IQSEC1                0.328   IQ motif and Sec7 domain 1 isoform b 
IQSEC3                0.180   IQ motif and Sec7 domain 3 
ARFGEF1               0.044   brefeldin A-inhibited guanine nucleotide-exchange pr...
CYTH2                 0.042   cytohesin 2 isoform 2 
CYTH2                 0.042   cytohesin 2 isoform 1 
ARFGEF2               0.040   ADP-ribosylation factor guanine nucleotide-exchange...
CYTH3                 0.040   cytohesin 3 
CYTH1                 0.040   cytohesin 1 isoform 2 
CYTH1                 0.040   cytohesin 1 isoform 1 
CYTH4                 0.037   cytohesin 4 
GBF1                  0.035   golgi-specific brefeldin A resistant guanine nucleoti...
FBXO8                 0.027   F-box only protein 8 
PSD                   0.026   pleckstrin and Sec7 domain containing 
MLL5                  0.022   myeloid/lymphoid or mixed-lineage leukemia 5 
MLL5                  0.022   myeloid/lymphoid or mixed-lineage leukemia 5 
FLJ22184              0.021   PREDICTED: hypothetical protein LOC80164 
FLJ22184              0.021   PREDICTED: hypothetical protein FLJ22184 
PRB2                  0.021   proline-rich protein BstNI subfamily 2 
PSD2                  0.021   pleckstrin and Sec7 domain containing 2 
SF3B4                 0.021   splicing factor 3b, subunit 4 
PTPN23                0.020   protein tyrosine phosphatase, non-receptor type 23 [...
PSD3                  0.019   ADP-ribosylation factor guanine nucleotide factor 6 ...
PSD3                  0.019   ADP-ribosylation factor guanine nucleotide factor 6...
WASF2                 0.019   WAS protein family, member 2 
PSD4                  0.019   pleckstrin and Sec7 domain containing 4 
PRB1                  0.019   proline-rich protein BstNI subfamily 1 isoform 1 pre...
FLJ22184              0.019   PREDICTED: hypothetical protein FLJ22184 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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