Guide to the Human Genome
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Name: FAM22E Sequence: fasta or formatted (629aa) NCBI GI: 239744142
Description:

PREDICTED: hypothetical protein isoform 1

Referenced in:

Testes and Sperm

Other entries for this name:
alt prot [878aa] PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         55           3
 C cysteine            3.0         19           2
 D aspartate           2.5         16           2
 E glutamate           7.0         44           3
 F phenylalanine       3.2         20           1
 G glycine             7.9         50           2
 H histidine           1.6         10           1
 I isoleucine          1.3          8           1
 K lysine              3.8         24           1
 L leucine            10.2         64           3
 M methionine          2.2         14           1
 N asparagine          1.7         11           1
 P proline            14.5         91           6
 Q glutamine           6.2         39           1
 R arginine            4.6         29           2
 S serine              7.5         47           2
 T threonine           5.2         33           2
 V valine              6.0         38           2
 W tryptophan          1.4          9           1
 Y tyrosine            1.3          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein isoform 1 
FAM22E                0.980   PREDICTED: hypothetical protein 
FAM22B                0.975   PREDICTED: hypothetical protein isoform 1 
FAM22A                0.963   hypothetical protein LOC728118 
FAM22D                0.850   hypothetical protein LOC728130 
FAM22G                0.671   hypothetical protein LOC441457 
FAM22F                0.671   hypothetical protein LOC54754 
C15orf55              0.320   nuclear protein in testis 
TTN                   0.023   titin isoform N2-A 
MLL4                  0.021   myeloid/lymphoid or mixed-lineage leukemia 4 
SAMD1                 0.021   sterile alpha motif domain containing 1 
TNK2                  0.020   tyrosine kinase, non-receptor, 2 isoform 2 
PELP1                 0.019   proline, glutamic acid and leucine rich protein 1 [...
WNK2                  0.019   WNK lysine deficient protein kinase 2 
WBP11                 0.019   WW domain binding protein 11 
SRCAP                 0.018   Snf2-related CBP activator protein 
PRG4                  0.017   proteoglycan 4 isoform D 
PRG4                  0.017   proteoglycan 4 isoform C 
PRG4                  0.017   proteoglycan 4 isoform B 
PRG4                  0.017   proteoglycan 4 isoform A 
TNK2                  0.017   tyrosine kinase, non-receptor, 2 isoform 1 
WASL                  0.017   Wiskott-Aldrich syndrome gene-like protein 
PRAM1                 0.017   PML-RARA regulated adaptor molecule 1 
ZNF414                0.017   zinc finger protein 414 isoform 1 
ZNF414                0.017   zinc finger protein 414 isoform 2 
ATN1                  0.017   atrophin-1 
ATN1                  0.017   atrophin-1 
WIPF2                 0.017   WIRE protein 
ARAP1                 0.016   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
SETD1B                0.016   SET domain containing 1B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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