Guide to the Human Genome
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Name: FAM22A Sequence: fasta or formatted (878aa) NCBI GI: 150170710
Description:

hypothetical protein LOC728118

Referenced in:

Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         75           3
 C cysteine            2.5         22           2
 D aspartate           2.5         22           2
 E glutamate           6.7         59           4
 F phenylalanine       2.6         23           1
 G glycine             9.0         79           2
 H histidine           2.1         18           1
 I isoleucine          0.8          7           1
 K lysine              4.7         41           2
 L leucine            10.6         93           3
 M methionine          1.9         17           1
 N asparagine          1.5         13           1
 P proline            13.8        121           6
 Q glutamine           6.3         55           2
 R arginine            5.6         49           2
 S serine              8.3         73           4
 T threonine           4.9         43           2
 V valine              5.5         48           2
 W tryptophan          1.5         13           2
 Y tyrosine            0.8          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC728118 
FAM22B                0.980   PREDICTED: hypothetical protein isoform 1 
FAM22E                0.976   PREDICTED: hypothetical protein 
FAM22F                0.702   hypothetical protein LOC54754 
FAM22E                0.690   PREDICTED: hypothetical protein isoform 1 
FAM22D                0.603   hypothetical protein LOC728130 
FAM22G                0.469   hypothetical protein LOC441457 
C15orf55              0.248   nuclear protein in testis 
BRD4                  0.017   bromodomain-containing protein 4 isoform long 
NACAD                 0.016   NAC alpha domain containing 
NACAD                 0.016   PREDICTED: NAC alpha domain containing 
SAMD1                 0.016   sterile alpha motif domain containing 1 
TTN                   0.015   titin isoform N2-A 
NACAD                 0.015   PREDICTED: NAC alpha domain containing 
NACAD                 0.015   PREDICTED: NAC alpha domain containing 
NACAD                 0.015   PREDICTED: NAC alpha domain containing 
MLL4                  0.015   myeloid/lymphoid or mixed-lineage leukemia 4 
PRG4                  0.014   proteoglycan 4 isoform D 
PRG4                  0.014   proteoglycan 4 isoform C 
PRG4                  0.014   proteoglycan 4 isoform B 
PRG4                  0.014   proteoglycan 4 isoform A 
TNK2                  0.014   tyrosine kinase, non-receptor, 2 isoform 2 
WASL                  0.014   Wiskott-Aldrich syndrome gene-like protein 
WIPF2                 0.013   WIRE protein 
PCLO                  0.013   piccolo isoform 2 
PCLO                  0.013   piccolo isoform 1 
NCOR2                 0.013   nuclear receptor co-repressor 2 isoform 2 
PRR12                 0.013   proline rich 12 
PELP1                 0.012   proline, glutamic acid and leucine rich protein 1 [...
PRRT1                 0.012   NG5 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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