Guide to the Human Genome
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Name: WASL Sequence: fasta or formatted (505aa) NCBI GI: 51702526
Description:

Wiskott-Aldrich syndrome gene-like protein

Referenced in:

Cytoskeleton
Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         33           2
 C cysteine            1.4          7           1
 D aspartate           6.1         31           3
 E glutamate           5.5         28           3
 F phenylalanine       3.0         15           1
 G glycine             6.9         35           2
 H histidine           1.4          7           1
 I isoleucine          3.0         15           1
 K lysine              6.5         33           3
 L leucine             6.3         32           3
 M methionine          1.6          8           1
 N asparagine          5.0         25           2
 P proline            17.8         90          11
 Q glutamine           4.4         22           3
 R arginine            5.5         28           2
 S serine              6.7         34           2
 T threonine           4.4         22           2
 V valine              5.5         28           2
 W tryptophan          0.8          4           1
 Y tyrosine            1.6          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Wiskott-Aldrich syndrome gene-like protein 
WAS                   0.404   Wiskott-Aldrich syndrome protein 
WASF2                 0.115   WAS protein family, member 2 
FMN2                  0.101   formin 2 
DIAPH1                0.089   diaphanous 1 isoform 2 
DIAPH1                0.089   diaphanous 1 isoform 1 
WASF1                 0.087   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.087   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.087   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.087   Wiskott-Aldrich syndrome protein family member 1 [Hom...
WASF3                 0.077   WAS protein family, member 3 
SAMD1                 0.076   sterile alpha motif domain containing 1 
ENAH                  0.076   enabled homolog isoform a 
ENAH                  0.076   enabled homolog isoform b 
FMNL1                 0.075   formin-like 1 
PRB1                  0.074   proline-rich protein BstNI subfamily 1 isoform 1 pre...
WBP11                 0.073   WW domain binding protein 11 
PRR12                 0.073   proline rich 12 
INF2                  0.073   inverted formin 2 isoform 2 
INF2                  0.073   inverted formin 2 isoform 1 
PRB2                  0.072   proline-rich protein BstNI subfamily 2 
FMN1                  0.072   formin 1 
CPSF6                 0.072   cleavage and polyadenylation specific factor 6, 68 ...
CCNK                  0.072   cyclin K isoform 1 
SFPQ                  0.070   splicing factor proline/glutamine rich (polypyrimidin...
WIPF2                 0.069   WIRE protein 
SF1                   0.068   splicing factor 1 isoform 1 
WIPF1                 0.068   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.068   WAS/WASL interacting protein family, member 1 
APBB1IP               0.067   amyloid beta (A4) precursor protein-binding, family ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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