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Search of human proteins with 5729785
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5729785 complement component 1, q subcomponent-like 1 [Homo
sapiens]
(258 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5729785 complement component 1, q subcomponent-like 1 [Homo s... 547 e-156
gi|58801559 complement component 1, q subcomponent-like 3 [Homo ... 405 e-113
gi|154937344 complement component 1, q subcomponent-like 2 [Homo... 365 e-101
gi|56606142 complement component 1, q subcomponent-like 4 [Homo ... 351 3e-97
gi|94818738 C1q and tumor necrosis factor related protein 2 [Hom... 132 2e-31
gi|87298828 complement component 1, q subcomponent, B chain prec... 130 9e-31
gi|65301115 C1q and tumor necrosis factor related protein 9 [Hom... 127 1e-29
gi|4757760 adiponectin precursor [Homo sapiens] 127 1e-29
gi|56847616 C1q and tumor necrosis factor related protein 9B [Ho... 126 2e-29
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 126 2e-29
gi|13994280 C1q and tumor necrosis factor related protein 7 isof... 123 1e-28
gi|206597454 C1q and tumor necrosis factor related protein 7 iso... 123 1e-28
gi|206597452 C1q and tumor necrosis factor related protein 7 iso... 123 1e-28
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 120 1e-27
gi|122937273 hypothetical protein LOC131149 [Homo sapiens] 120 1e-27
gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens] 120 1e-27
gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens] 120 1e-27
gi|7705753 complement component 1, q subcomponent, A chain precu... 119 3e-27
gi|62739183 C1q and tumor necrosis factor related protein 3 isof... 111 7e-25
gi|56786155 complement component 1, q subcomponent, C chain prec... 108 5e-24
gi|166235903 complement component 1, q subcomponent, C chain pre... 108 5e-24
gi|13569919 C1q and tumor necrosis factor related protein 3 isof... 108 5e-24
gi|14149712 C1q and tumor necrosis factor related protein 5 prec... 105 3e-23
gi|5901944 elastin microfibril interfacer 1 [Homo sapiens] 105 4e-23
gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens] 87 1e-17
gi|50428931 C1q domain containing 1 isoform 3 [Homo sapiens] 87 1e-17
gi|23503235 C1q domain containing 1 isoform 2 [Homo sapiens] 87 1e-17
gi|116686136 C1q and tumor necrosis factor related protein 8 [Ho... 84 9e-17
gi|32967300 C1q and tumor necrosis factor related protein 6 [Hom... 82 4e-16
gi|32967294 C1q and tumor necrosis factor related protein 6 [Hom... 82 4e-16
>gi|5729785 complement component 1, q subcomponent-like 1 [Homo
sapiens]
Length = 258
Score = 547 bits (1409), Expect = e-156
Identities = 258/258 (100%), Positives = 258/258 (100%)
Query: 1 MLLVLVVLIPVLVSSGGPEGHYEMLGTCRMVCDPYPARGPGAGARTDGGDALSEQSGAPP 60
MLLVLVVLIPVLVSSGGPEGHYEMLGTCRMVCDPYPARGPGAGARTDGGDALSEQSGAPP
Sbjct: 1 MLLVLVVLIPVLVSSGGPEGHYEMLGTCRMVCDPYPARGPGAGARTDGGDALSEQSGAPP 60
Query: 61 PSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAIS 120
PSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAIS
Sbjct: 61 PSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAIS 120
Query: 121 TATYTTVPRVAFYAGLKNPHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFTYHV 180
TATYTTVPRVAFYAGLKNPHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFTYHV
Sbjct: 121 TATYTTVPRVAFYAGLKNPHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFTYHV 180
Query: 181 LMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFIKLDGGKAH 240
LMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFIKLDGGKAH
Sbjct: 181 LMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFIKLDGGKAH 240
Query: 241 GGNSNKYSTFSGFIIYSD 258
GGNSNKYSTFSGFIIYSD
Sbjct: 241 GGNSNKYSTFSGFIIYSD 258
>gi|58801559 complement component 1, q subcomponent-like 3 [Homo
sapiens]
Length = 255
Score = 405 bits (1042), Expect = e-113
Identities = 194/262 (74%), Positives = 216/262 (82%), Gaps = 11/262 (4%)
Query: 1 MLLVLVVLIPVLVSSGGPEGHYEMLGTCRMVCDPYPA-RGPGAGARTDGGDALSEQSGAP 59
M+L+LV+LIPVLVSS G HYEMLGTCRMVCDPY + P A D G S
Sbjct: 1 MVLLLVILIPVLVSSAGTSAHYEMLGTCRMVCDPYGGTKAPSTAATPDRGLMQSLP---- 56
Query: 60 PPSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGK---PGPPGLPGAGGS 116
T +QGP+G+ GR GK GP GPPG+PGPPGP+GPPGEKGEPG+ PGPPG PG +
Sbjct: 57 ---TFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAA 113
Query: 117 GAISTATYTTVPRVAFYAGLKNPHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFF 176
GAIS ATY+TVP++AFYAGLK HEGYEVLKFDDVVTNLGN+YD +GKFTC+IPG YFF
Sbjct: 114 GAISAATYSTVPKIAFYAGLKRQHEGYEVLKFDDVVTNLGNHYDPTTGKFTCSIPGIYFF 173
Query: 177 TYHVLMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFIKLDG 236
TYHVLMRGGDGTSMWADLCKN QVRASAIAQDADQNYDYASNSV+LHL+ GDEV+IKLDG
Sbjct: 174 TYHVLMRGGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNSVVLHLEPGDEVYIKLDG 233
Query: 237 GKAHGGNSNKYSTFSGFIIYSD 258
GKAHGGN+NKYSTFSGFIIY+D
Sbjct: 234 GKAHGGNNNKYSTFSGFIIYAD 255
>gi|154937344 complement component 1, q subcomponent-like 2 [Homo
sapiens]
Length = 287
Score = 365 bits (938), Expect = e-101
Identities = 179/288 (62%), Positives = 213/288 (73%), Gaps = 31/288 (10%)
Query: 1 MLLVLVVLIPVLVSSGGPEG--HYEMLGTCRMVCDPYPA----RGPGAGARTDGGDALS- 53
M L L++ +P+L+ + P G HYEM+GTCRM+CDPY A PGA A+ G +
Sbjct: 1 MALGLLIAVPLLLQAA-PRGAAHYEMMGTCRMICDPYTAAPGGEPPGAKAQPPGPSTAAL 59
Query: 54 ---EQSGAPPPSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGL 110
+ A PP +QGP+G PGR GKPGP GPPG+PGPPGP GPPGEKG+ G+PG PGL
Sbjct: 60 EVMQDLSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGL 119
Query: 111 P----------------GAGGS--GAISTATYTTV--PRVAFYAGLKNPHEGYEVLKFDD 150
G GG G +++A T P++AFY GLK+PHEGYEVLKFDD
Sbjct: 120 QLTAGTASGVGVVGGGAGVGGDSEGEVTSALSATFSGPKIAFYVGLKSPHEGYEVLKFDD 179
Query: 151 VVTNLGNNYDAASGKFTCNIPGTYFFTYHVLMRGGDGTSMWADLCKNGQVRASAIAQDAD 210
VVTNLGN+YD +GKF+C + G YFFTYH+LMRGGDGTSMWADLCKNGQVRASAIAQDAD
Sbjct: 180 VVTNLGNHYDPTTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDAD 239
Query: 211 QNYDYASNSVILHLDAGDEVFIKLDGGKAHGGNSNKYSTFSGFIIYSD 258
QNYDYASNSV+LHLD+GDEV++KLDGGKAHGGN+NKYSTFSGF++Y D
Sbjct: 240 QNYDYASNSVVLHLDSGDEVYVKLDGGKAHGGNNNKYSTFSGFLLYPD 287
>gi|56606142 complement component 1, q subcomponent-like 4 [Homo
sapiens]
Length = 238
Score = 351 bits (901), Expect = 3e-97
Identities = 180/258 (69%), Positives = 195/258 (75%), Gaps = 20/258 (7%)
Query: 1 MLLVLVVLIPVLVSSGGPEGHYEMLGTCRMVCDPYPARGPGAGARTDGGDALSEQSGAPP 60
M+L+L+V IP+LV S HYEMLG CRMVCDP+ RGPG DG A PP
Sbjct: 1 MVLLLLVAIPLLVHSSRGPAHYEMLGRCRMVCDPHGPRGPGP----DGAPA-----SVPP 51
Query: 61 PSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAIS 120
G +G+ GR GK G GPPG PPGP GPPGE PG+PGPPG PG G G
Sbjct: 52 ---FPPGAKGEVGRRGKAGLRGPPG---PPGPRGPPGE---PGRPGPPGPPGPGPGGVAP 102
Query: 121 TATYTTVPRVAFYAGLKNPHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFTYHV 180
A Y VPR+AFYAGL+ PHEGYEVL+FDDVVTN+GN Y+AASGKFTC +PG YFF YHV
Sbjct: 103 AAGY--VPRIAFYAGLRRPHEGYEVLRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHV 160
Query: 181 LMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFIKLDGGKAH 240
LMRGGDGTSMWADL KNGQVRASAIAQDADQNYDYASNSVILHLD GDEVFIKLDGGK H
Sbjct: 161 LMRGGDGTSMWADLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKLDGGKVH 220
Query: 241 GGNSNKYSTFSGFIIYSD 258
GGN+NKYSTFSGFIIY D
Sbjct: 221 GGNTNKYSTFSGFIIYPD 238
>gi|94818738 C1q and tumor necrosis factor related protein 2 [Homo
sapiens]
Length = 330
Score = 132 bits (333), Expect = 2e-31
Identities = 86/245 (35%), Positives = 121/245 (49%), Gaps = 21/245 (8%)
Query: 17 GPEGHYEMLGTCRMVCDPYPARGPGAGARTDGGDALSEQSGAPPPSTLVQGPQGKPGRTG 76
GP G +G +P + G D GD+ E + GP+GK G G
Sbjct: 97 GPSGMMGRMG--------FPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKAGAIG 148
Query: 77 KPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAISTATYTTVPRVAFYAGL 136
+ GP GP G G PG G PG+KG GK G PGLPG G+ T + +V Y
Sbjct: 149 RAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGSGHTKSAFSVAVTKSYPRE 208
Query: 137 KNPHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFTYHVLMRGGDGTSMWADLCK 196
+ P +KFD ++ N G +Y+A+SGKF C +PG Y+FTY + + + L
Sbjct: 209 RLP------IKFDKILMNEGGHYNASSGKFVCGVPGIYYFTYDITLA---NKHLAIGLVH 259
Query: 197 NGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFIKLDGGKAHGGNSNKY---STFSGF 253
NGQ R + N+D AS S IL L GDEV++++ + +G + Y S F+GF
Sbjct: 260 NGQYRIRTFDANTG-NHDVASGSTILALKQGDEVWLQIFYSEQNGLFYDPYWTDSLFTGF 318
Query: 254 IIYSD 258
+IY+D
Sbjct: 319 LIYAD 323
>gi|87298828 complement component 1, q subcomponent, B chain
precursor [Homo sapiens]
Length = 253
Score = 130 bits (328), Expect = 9e-31
Identities = 88/266 (33%), Positives = 124/266 (46%), Gaps = 37/266 (13%)
Query: 1 MLLVLVVLIPVLVSSGGPEGHYEMLGTCRMVCDPYPARGPGAGARTDGGDALSEQSGAPP 60
MLL+L+ LI + + G + G + P P PG + + G P
Sbjct: 14 MLLLLLGLIDISQAQLSCTGPPAIPGIPGIPGTPGPDGQPGT-------PGIKGEKGLP- 65
Query: 61 PSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAIS 120
G G G G+ G PG PG+PG GP GP G KG PG PG PG G G
Sbjct: 66 ------GLAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGD---- 115
Query: 121 TATYTTVPRVAFYAG--LKNPHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFTY 178
Y ++AF A + P + ++FD V+TN+ NNY+ SGKFTC +PG Y+FTY
Sbjct: 116 ---YKATQKIAFSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTY 172
Query: 179 HVLMRGGDGTSMWADLCKN---GQVRASAIAQDADQNYD---YASNSVILHLDAGDEVFI 232
H RG +LC N G+ RA + D Y+ + ++L L+ G+ VF+
Sbjct: 173 HASSRG--------NLCVNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFL 224
Query: 233 KLDGGKAHGGNSNKYSTFSGFIIYSD 258
+ + G S FSGF+++ D
Sbjct: 225 QATDKNSLLGMEGANSIFSGFLLFPD 250
>gi|65301115 C1q and tumor necrosis factor related protein 9 [Homo
sapiens]
Length = 333
Score = 127 bits (319), Expect = 1e-29
Identities = 79/208 (37%), Positives = 109/208 (52%), Gaps = 24/208 (11%)
Query: 67 GPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGA----------GGS 116
GP G G G GP GP G PGP GP+G PG KGE G GP G PG G
Sbjct: 131 GPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGDRGEK 190
Query: 117 GAISTATYTTVPRVAFYAGL----KNPHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPG 172
G I +P+ AF GL K P + KFD ++ N N+YD A+GKFTC+I G
Sbjct: 191 GKIGET--LVLPKSAFTVGLTVLSKFPSSDMPI-KFDKILYNEFNHYDTAAGKFTCHIAG 247
Query: 173 TYFFTYHVLMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFI 232
Y+FTYH+ + ++ L KNG V+ + D AS ++L L GDEV++
Sbjct: 248 VYYFTYHITV---FSRNVQVSLVKNG-VKILHTKDAYMSSEDQASGGIVLQLKLGDEVWL 303
Query: 233 KLDGGKAHGG---NSNKYSTFSGFIIYS 257
++ GG+ G + + +TF+GF+++S
Sbjct: 304 QVTGGERFNGLFADEDDDTTFTGFLLFS 331
Score = 52.4 bits (124), Expect = 4e-07
Identities = 24/47 (51%), Positives = 26/47 (55%)
Query: 69 QGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGG 115
QG PG G PG G PG G G G G+ GEPG+PG PG G G
Sbjct: 25 QGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSG 71
Score = 48.1 bits (113), Expect = 7e-06
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 71 KPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGS 116
+ G G PG PG G PG G G G+KG+ G+PG PG PG G+
Sbjct: 24 RQGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGT 69
Score = 47.4 bits (111), Expect = 1e-05
Identities = 23/47 (48%), Positives = 25/47 (53%)
Query: 74 RTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAIS 120
R G PG PG PG G PG G G KG+ G G PG PG+ G S
Sbjct: 24 RQGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTS 70
Score = 45.8 bits (107), Expect = 4e-05
Identities = 24/53 (45%), Positives = 24/53 (45%)
Query: 63 TLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGG 115
T QG G PG G G PG G G G G GE G PG PG G G G
Sbjct: 22 TCRQGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSGEKG 74
Score = 45.4 bits (106), Expect = 5e-05
Identities = 22/50 (44%), Positives = 23/50 (46%)
Query: 67 GPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGS 116
G G PG G PG G G G G G PG G PGK G G G G+
Sbjct: 29 GIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGA 78
Score = 45.4 bits (106), Expect = 5e-05
Identities = 21/46 (45%), Positives = 24/46 (52%)
Query: 67 GPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPG 112
G G PGR G+ G G GD G PG G PG+ G G+ G G G
Sbjct: 35 GHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGADG 80
Score = 44.3 bits (103), Expect = 1e-04
Identities = 22/50 (44%), Positives = 24/50 (48%)
Query: 67 GPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGS 116
G G G G G PG PG PG G G GE+G GK G+ G GS
Sbjct: 44 GRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGS 93
Score = 41.6 bits (96), Expect = 7e-04
Identities = 21/49 (42%), Positives = 24/49 (48%)
Query: 67 GPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGG 115
G G+ GR G G G G+PG PG G G GE G+ G G A G
Sbjct: 38 GLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGADGKVEAKG 86
>gi|4757760 adiponectin precursor [Homo sapiens]
Length = 244
Score = 127 bits (318), Expect = 1e-29
Identities = 85/233 (36%), Positives = 118/233 (50%), Gaps = 25/233 (10%)
Query: 38 RGPGAGARTDGGDALSEQSGAPPPSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPG 97
+GPG G +G P G G PGR G+ G PG G+ G PG +GP G
Sbjct: 23 QGPGVLLPLPKGACTGWMAGIPGHP----GHNGAPGRDGRDGTPGEKGEKGDPGLIGPKG 78
Query: 98 EKGE---PGKPGPPGLPG-AGGSGAISTATYTTVPRVAFYAGLKNPHEGYEV-----LKF 148
+ GE PG GP G PG G G Y V R AF GL E Y ++F
Sbjct: 79 DIGETGVPGAEGPRGFPGIQGRKGEPGEGAY--VYRSAFSVGL----ETYVTIPNMPIRF 132
Query: 149 DDVVTNLGNNYDAASGKFTCNIPGTYFFTYHVLMRGGDGTSMWADLCKNGQVRASAIAQD 208
+ N N+YD ++GKF CNIPG Y+F YH+ + D + L K + Q
Sbjct: 133 TKIFYNQQNHYDGSTGKFHCNIPGLYYFAYHITVYMKD---VKVSLFKKDKAMLFTYDQY 189
Query: 209 ADQNYDYASNSVILHLDAGDEVFIKLDG-GKAHG--GNSNKYSTFSGFIIYSD 258
+ N D AS SV+LHL+ GD+V++++ G G+ +G +++ STF+GF++Y D
Sbjct: 190 QENNVDQASGSVLLHLEVGDQVWLQVYGEGERNGLYADNDNDSTFTGFLLYHD 242
>gi|56847616 C1q and tumor necrosis factor related protein 9B [Homo
sapiens]
Length = 333
Score = 126 bits (317), Expect = 2e-29
Identities = 79/208 (37%), Positives = 109/208 (52%), Gaps = 24/208 (11%)
Query: 67 GPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGA----------GGS 116
GP G G G GP GP G PGP GP+G PG KGE G GP G PG G
Sbjct: 131 GPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGDRGEK 190
Query: 117 GAISTATYTTVPRVAFYAGL----KNPHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPG 172
G I +P+ AF GL K P + KFD ++ N N+YD A GKFTC+I G
Sbjct: 191 GKIGET--LVLPKSAFTVGLTVLSKFPSSDVPI-KFDKILYNEFNHYDTAVGKFTCHIAG 247
Query: 173 TYFFTYHVLMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFI 232
Y+FTYH+ + ++ L KNG V+ + D AS S++L L GDE+++
Sbjct: 248 VYYFTYHITV---FSRNVQVSLVKNG-VKILHTRDAYVSSEDQASGSIVLQLKLGDEMWL 303
Query: 233 KLDGGKAHGG---NSNKYSTFSGFIIYS 257
++ GG+ G + + +TF+GF+++S
Sbjct: 304 QVTGGERFNGLFADEDDDTTFTGFLLFS 331
Score = 50.4 bits (119), Expect = 1e-06
Identities = 24/47 (51%), Positives = 25/47 (53%)
Query: 69 QGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGG 115
QG PG G PG G PG G G G G+ GEPG PG PG G G
Sbjct: 25 QGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSG 71
Score = 47.8 bits (112), Expect = 1e-05
Identities = 23/47 (48%), Positives = 25/47 (53%)
Query: 74 RTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAIS 120
R G PG PG PG G PG G G KG+ G G PG PG+ G S
Sbjct: 24 RQGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTS 70
Score = 47.8 bits (112), Expect = 1e-05
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 71 KPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGS 116
+ G G PG PG G PG G G G+KG+ G+PG PG PG G+
Sbjct: 24 RQGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPGKDGT 69
Score = 45.1 bits (105), Expect = 6e-05
Identities = 21/46 (45%), Positives = 24/46 (52%)
Query: 67 GPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPG 112
G G PGR G+ G G GD G PG G PG+ G G+ G G G
Sbjct: 35 GHNGLPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERGADG 80
Score = 44.3 bits (103), Expect = 1e-04
Identities = 24/53 (45%), Positives = 24/53 (45%)
Query: 63 TLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGG 115
T QG G PG G G PG G G G G GE G PG PG G G G
Sbjct: 22 TCRQGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSGEKG 74
Score = 43.9 bits (102), Expect = 1e-04
Identities = 22/50 (44%), Positives = 23/50 (46%)
Query: 67 GPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGS 116
G G PG G PG G G G G G PG G PGK G G G G+
Sbjct: 29 GIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERGA 78
Score = 43.9 bits (102), Expect = 1e-04
Identities = 22/50 (44%), Positives = 24/50 (48%)
Query: 67 GPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGS 116
G G G G G PG PG PG G G GE+G GK G+ G GS
Sbjct: 44 GRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGS 93
Score = 41.2 bits (95), Expect = 0.001
Identities = 21/49 (42%), Positives = 24/49 (48%)
Query: 67 GPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGG 115
G G+ GR G G G G+PG PG G G GE G+ G G A G
Sbjct: 38 GLPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERGADGKVEAKG 86
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 126 bits (316), Expect = 2e-29
Identities = 91/268 (33%), Positives = 122/268 (45%), Gaps = 33/268 (12%)
Query: 16 GGPEGHYEMLGTCRMVCDPYPARGPGAGARTDGGDALSEQSGAPPPSTLVQGPQGKPGRT 75
GGP G +G P AG R G + PP G +G PG
Sbjct: 415 GGPPGLPGPVGPAG--AKGMPGHNGEAGPRGAPGIPGTRGPIGPPGIPGFPGSKGDPGSP 472
Query: 76 GKPGPPG--------PPGDPGPPGPVGPPGEKGEPGKPGPPGLPG----------AGGSG 117
G PGP G P G PGPPGP G GE G PG PGPPG PG AG
Sbjct: 473 GPPGPAGIATKGLNGPTGPPGPPGPRGHSGEPGLPGPPGPPGPPGQAVMPEGFIKAGQRP 532
Query: 118 AIS-------TATYTTVPRVAFYAGLKNPHEGYEV-LKFDDVVTNLGNNYDAASGKFTCN 169
++S T +P AF L + + FD ++ N +YD +G FTC
Sbjct: 533 SLSGTPLVSANQGVTGMPVSAFTVILSKAYPAIGTPIPFDKILYNRQQHYDPRTGIFTCQ 592
Query: 170 IPGTYFFTYHVLMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDE 229
IPG Y+F+YHV ++ GT +W L KNG + D AS S I+ L D+
Sbjct: 593 IPGIYYFSYHVHVK---GTHVWVGLYKNGTPVMYTYDEYTKGYLDQASGSAIIDLTENDQ 649
Query: 230 VFIKLDGGKAHGGNSNKY--STFSGFII 255
V+++L +++G S++Y S+FSGF++
Sbjct: 650 VWLQLPNAESNGLYSSEYVHSSFSGFLV 677
Score = 67.0 bits (162), Expect = 2e-11
Identities = 32/54 (59%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 66 QGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPG-AGGSGA 118
+G +G PG GKPG PG PG GP G G PG KG+PG GPPGLPG G +GA
Sbjct: 376 KGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGA 429
Score = 66.2 bits (160), Expect = 3e-11
Identities = 42/101 (41%), Positives = 45/101 (44%), Gaps = 20/101 (19%)
Query: 17 GPEGHYEMLGTCRMVCDPYPARGPGAGARTDGGDALSEQSGAPPPSTLVQGPQ--GKPGR 74
GP GH P P+ PG G L + G P P GP GKPG
Sbjct: 69 GPRGH------------PGPSGPPGKPGY--GSPGLQGEPGLPGPP----GPSAVGKPGV 110
Query: 75 TGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGG 115
G PG PG G GP G VGP G G G PGPPG+PG G
Sbjct: 111 PGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAG 151
Score = 65.5 bits (158), Expect = 4e-11
Identities = 39/86 (45%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 38 RGP-----GAGARTDGGDA-LSEQSG--APPPSTLVQGPQGKPGRTGKPGPPGPPGDPGP 89
RGP G GA+ + G A L + G PP + QGP+G PG G PGP G G GP
Sbjct: 310 RGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGP 369
Query: 90 PGPVGPPGEKGEPGKPGPPGLPGAGG 115
G G GE+G PG G PG PG G
Sbjct: 370 AGYPGAKGERGSPGSDGKPGYPGKPG 395
Score = 65.5 bits (158), Expect = 4e-11
Identities = 41/99 (41%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 17 GPEGHYEMLGTCRMVCDPYPARGPGAGARTDGGDALSEQSGAPPPSTLVQGPQGKPGRTG 76
GP+G + G+ + P GP A G + G+P G GKPG G
Sbjct: 344 GPQGPKGIPGSHGLP-GPKGETGPAGPAGYPGAKG---ERGSP-------GSDGKPGYPG 392
Query: 77 KPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGG 115
KPG GP G+PG PGP G PG G PG PGP G GA G
Sbjct: 393 KPGLDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKG 431
Score = 65.1 bits (157), Expect = 6e-11
Identities = 37/85 (43%), Positives = 44/85 (51%), Gaps = 14/85 (16%)
Query: 36 PARGPGAGARTDGGDALSEQSGAPPPSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGP--V 93
P+ PG G R + G P ++G +G PG G GPPGP G PG GP +
Sbjct: 213 PSGPPGVGKRGENG---------VPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGI 263
Query: 94 GPPGEKGEPGKPGPP---GLPGAGG 115
G PG G PG+PG P GLPGA G
Sbjct: 264 GKPGAAGAPGQPGIPGTKGLPGAPG 288
Score = 65.1 bits (157), Expect = 6e-11
Identities = 34/79 (43%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 43 GARTDGGDALSEQSGAPPPSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGP------P 96
GA+ + G S+ P + GP+G PG G G PG G PG PGPVGP P
Sbjct: 374 GAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMP 433
Query: 97 GEKGEPGKPGPPGLPGAGG 115
G GE G G PG+PG G
Sbjct: 434 GHNGEAGPRGAPGIPGTRG 452
Score = 63.5 bits (153), Expect = 2e-10
Identities = 46/114 (40%), Positives = 48/114 (42%), Gaps = 32/114 (28%)
Query: 34 PYPARGPGAGAR----TDGGDALSEQSGAPPPSTLVQGPQGKPGRTGKPGPPGPPGDPGP 89
PY + G R T G + G P PS GP GKPG G PG G PG PGP
Sbjct: 45 PYTIKSKGIAVRGEQGTPGPPGPAGPRGHPGPS----GPPGKPGY-GSPGLQGEPGLPGP 99
Query: 90 PGP--VGPPGEKGEPGKPG---------------------PPGLPGAGGSGAIS 120
PGP VG PG G PGKPG PPG PG G IS
Sbjct: 100 PGPSAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGIS 153
Score = 59.7 bits (143), Expect = 2e-09
Identities = 46/162 (28%), Positives = 55/162 (33%), Gaps = 52/162 (32%)
Query: 9 IPVLVSSGGPEGHYEMLGTCRMVCDPYPARGPG-------AGARTDGGDALSEQSGAPPP 61
+P L G G Y G P P PG AG G +GAP P
Sbjct: 110 VPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISVPGKPGQQGPTGAPGP 169
Query: 62 -------------------STLVQGPQGKPGRTGKPGPPGPPGDPGPPG----------- 91
+ G G+PG G PGP GP G GPPG
Sbjct: 170 RGFPGEKGAPGVPGMNGQKGEMGYGAPGRPGERGLPGPQGPTGPSGPPGVGKRGENGVPG 229
Query: 92 ---------------PVGPPGEKGEPGKPGPPGLPGAGGSGA 118
P+GPPG +G PG+ GP G+ G +GA
Sbjct: 230 QPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGAAGA 271
Score = 57.4 bits (137), Expect = 1e-08
Identities = 31/71 (43%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 60 PPSTLVQGPQGKPGRTGKPGPPGPPGDPGP---PGPVGPPGEK-----GEPGKPGPPGLP 111
PP +G G PG+ G G G PG+ GP PGP GPPGE+ G+PG G PG P
Sbjct: 216 PPGVGKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGAAGAPGQP 275
Query: 112 GAGGSGAISTA 122
G G+ + A
Sbjct: 276 GIPGTKGLPGA 286
Score = 56.2 bits (134), Expect = 3e-08
Identities = 30/68 (44%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 73 GRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAISTATYTTVPRVAF 132
G G PGPPGP G G PGP GPPG+ G G PG G PG G S VP +
Sbjct: 57 GEQGTPGPPGPAGPRGHPGPSGPPGKPGY-GSPGLQGEPGLPGPPGPSAVGKPGVPGLPG 115
Query: 133 YAGLKNPH 140
G + P+
Sbjct: 116 KPGERGPY 123
Score = 55.5 bits (132), Expect = 5e-08
Identities = 29/62 (46%), Positives = 31/62 (50%)
Query: 58 APPPSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSG 117
A PP G G PG G+ GP G PG PG G GP G G+PG GPPG G G
Sbjct: 290 AGPPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGPQGPK 349
Query: 118 AI 119
I
Sbjct: 350 GI 351
Score = 54.7 bits (130), Expect = 8e-08
Identities = 41/105 (39%), Positives = 46/105 (43%), Gaps = 25/105 (23%)
Query: 34 PYPARGPGAGARTDGGDALSEQSGAP-----PPSTLVQGPQGKPGRTGKPGPPGPPGDPG 88
P RGP G G Q G P P + + GP G PG GKPG PG G+ G
Sbjct: 254 PPGERGP-EGIGKPGAAGAPGQPGIPGTKGLPGAPGIAGPPGPPG-FGKPGLPGLKGERG 311
Query: 89 PPGPVGPPGEKGE------PGKPG------------PPGLPGAGG 115
P G G PG KGE PGKPG P G+PG+ G
Sbjct: 312 PAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHG 356
Score = 52.4 bits (124), Expect = 4e-07
Identities = 38/89 (42%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 34 PYPARGPGAGARTDGGDALSEQSGAP--PPSTLVQGPQGKPGRTGKPGPPG--PPGDPGP 89
P +GP G R G +GAP P +G G PG G PGPPG PG PG
Sbjct: 248 PPGPQGP-PGERGPEGIGKPGAAGAPGQPGIPGTKGLPGAPGIAGPPGPPGFGKPGLPGL 306
Query: 90 PGPVGPPGEKGEP---GKPGPPGLPGAGG 115
G GP G G P G+ GP GLPG G
Sbjct: 307 KGERGPAGLPGGPGAKGEQGPAGLPGKPG 335
Score = 50.1 bits (118), Expect = 2e-06
Identities = 30/72 (41%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 67 GPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAISTATYTT 126
G +G+ G G PG PG G+ GP G G PG G PG GP G G GS + T
Sbjct: 305 GLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGET 364
Query: 127 VPR-VAFYAGLK 137
P A Y G K
Sbjct: 365 GPAGPAGYPGAK 376
>gi|13994280 C1q and tumor necrosis factor related protein 7 isoform
b [Homo sapiens]
Length = 289
Score = 123 bits (309), Expect = 1e-28
Identities = 92/288 (31%), Positives = 134/288 (46%), Gaps = 42/288 (14%)
Query: 1 MLLVLVVLIPVLVSSGGPEGH------YEMLGTCRMVCDPYPARGPGAGART-------- 46
M ++L V + +SG P G+ Y C + P P PGA
Sbjct: 1 MFVLLYVTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGL 60
Query: 47 ---DGGDALSEQSGAPPPSTL--------VQGPQGKPGRTGKPGPPGPPGDPGPPGPVGP 95
DG D + G + L + G +G G TGK GP GP G+ G GP+GP
Sbjct: 61 PGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGP 120
Query: 96 PGEKGEPGKPGPPGLPGAGGSGAISTATYTTVPRVAFYAGLKN--PHEGYEVLKFDDVVT 153
PG KG+ G+ G PGLPG G+I V + AF G+ P E ++ F+ V+
Sbjct: 121 PGPKGDRGEQGDPGLPGVCRCGSI-------VLKSAFSVGITTSYPEERLPII-FNKVLF 172
Query: 154 NLGNNYDAASGKFTCNIPGTYFFTYHVLMRGGDGTSMWADLCKNGQVRASAIAQDADQNY 213
N G +Y+ A+GKF C PG Y+F+Y + + + L NGQ R + N+
Sbjct: 173 NEGEHYNPATGKFICAFPGIYYFSYDITLA---NKHLAIGLVHNGQYRIKTFDANTG-NH 228
Query: 214 DYASNSVILHLDAGDEVFIKLDGGKAHGGNSN---KYSTFSGFIIYSD 258
D AS S +++L DEV++++ +G S+ S FSGF++Y D
Sbjct: 229 DVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVD 276
>gi|206597454 C1q and tumor necrosis factor related protein 7
isoform b [Homo sapiens]
Length = 289
Score = 123 bits (309), Expect = 1e-28
Identities = 92/288 (31%), Positives = 134/288 (46%), Gaps = 42/288 (14%)
Query: 1 MLLVLVVLIPVLVSSGGPEGH------YEMLGTCRMVCDPYPARGPGAGART-------- 46
M ++L V + +SG P G+ Y C + P P PGA
Sbjct: 1 MFVLLYVTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGL 60
Query: 47 ---DGGDALSEQSGAPPPSTL--------VQGPQGKPGRTGKPGPPGPPGDPGPPGPVGP 95
DG D + G + L + G +G G TGK GP GP G+ G GP+GP
Sbjct: 61 PGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGP 120
Query: 96 PGEKGEPGKPGPPGLPGAGGSGAISTATYTTVPRVAFYAGLKN--PHEGYEVLKFDDVVT 153
PG KG+ G+ G PGLPG G+I V + AF G+ P E ++ F+ V+
Sbjct: 121 PGPKGDRGEQGDPGLPGVCRCGSI-------VLKSAFSVGITTSYPEERLPII-FNKVLF 172
Query: 154 NLGNNYDAASGKFTCNIPGTYFFTYHVLMRGGDGTSMWADLCKNGQVRASAIAQDADQNY 213
N G +Y+ A+GKF C PG Y+F+Y + + + L NGQ R + N+
Sbjct: 173 NEGEHYNPATGKFICAFPGIYYFSYDITLA---NKHLAIGLVHNGQYRIKTFDANTG-NH 228
Query: 214 DYASNSVILHLDAGDEVFIKLDGGKAHGGNSN---KYSTFSGFIIYSD 258
D AS S +++L DEV++++ +G S+ S FSGF++Y D
Sbjct: 229 DVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVD 276
>gi|206597452 C1q and tumor necrosis factor related protein 7
isoform a [Homo sapiens]
Length = 296
Score = 123 bits (309), Expect = 1e-28
Identities = 92/288 (31%), Positives = 134/288 (46%), Gaps = 42/288 (14%)
Query: 1 MLLVLVVLIPVLVSSGGPEGH------YEMLGTCRMVCDPYPARGPGAGART-------- 46
M ++L V + +SG P G+ Y C + P P PGA
Sbjct: 8 MFVLLYVTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGL 67
Query: 47 ---DGGDALSEQSGAPPPSTL--------VQGPQGKPGRTGKPGPPGPPGDPGPPGPVGP 95
DG D + G + L + G +G G TGK GP GP G+ G GP+GP
Sbjct: 68 PGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGP 127
Query: 96 PGEKGEPGKPGPPGLPGAGGSGAISTATYTTVPRVAFYAGLKN--PHEGYEVLKFDDVVT 153
PG KG+ G+ G PGLPG G+I V + AF G+ P E ++ F+ V+
Sbjct: 128 PGPKGDRGEQGDPGLPGVCRCGSI-------VLKSAFSVGITTSYPEERLPII-FNKVLF 179
Query: 154 NLGNNYDAASGKFTCNIPGTYFFTYHVLMRGGDGTSMWADLCKNGQVRASAIAQDADQNY 213
N G +Y+ A+GKF C PG Y+F+Y + + + L NGQ R + N+
Sbjct: 180 NEGEHYNPATGKFICAFPGIYYFSYDITLA---NKHLAIGLVHNGQYRIKTFDANTG-NH 235
Query: 214 DYASNSVILHLDAGDEVFIKLDGGKAHGGNSN---KYSTFSGFIIYSD 258
D AS S +++L DEV++++ +G S+ S FSGF++Y D
Sbjct: 236 DVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVD 283
>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
Length = 703
Score = 120 bits (301), Expect = 1e-27
Identities = 82/242 (33%), Positives = 116/242 (47%), Gaps = 33/242 (13%)
Query: 38 RGPGAGARTDGGDALSEQSGAPPPSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPG 97
+GP G L + G P P +G+ G G GP GPPG PG PG GPPG
Sbjct: 468 QGPAGPIGPQGLPGLKGEPGLPGPPG-----EGRAGEPGTAGPTGPPGVPGSPGITGPPG 522
Query: 98 EKGEPGKPGPPG-----------LPGAGGSGAI---------STATYTTVPRVAFYAGLK 137
G PG PG PG LP G GA+ + AF A L
Sbjct: 523 PPGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLT 582
Query: 138 NPHEGYEV-LKFDDVVTNLGNNYDAASGKFTCNIPGTYFFTYHVLMRGGDGTSMWADLCK 196
+P + +KFD + N + Y+ A+G FTC + G Y+F YHV ++ GT++W L K
Sbjct: 583 SPFPASGMPVKFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVK---GTNVWVALYK 639
Query: 197 NGQVRASAIAQDADQNY-DYASNSVILHLDAGDEVFIKLDGGKAHGGNSNKY--STFSGF 253
N V A+ + + Y D AS +L L D+V++++ +A+G S +Y S+FSGF
Sbjct: 640 N-NVPATYTYDEYKKGYLDQASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGF 698
Query: 254 II 255
++
Sbjct: 699 LL 700
Score = 70.1 bits (170), Expect = 2e-12
Identities = 45/94 (47%), Positives = 48/94 (51%), Gaps = 12/94 (12%)
Query: 34 PYPARGPG-AGARTDGGDALSEQSG----APPPSTLVQGPQGKPGRTGKPGPPGP----- 83
P P PG AG G D L G + PP V GP+G+PG G GPPG
Sbjct: 225 PGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPG--VPGPRGEPGAVGPKGPPGVDGVGV 282
Query: 84 PGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSG 117
PG G PGP GP G KGEPG GPPGL G G G
Sbjct: 283 PGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYG 316
Score = 67.8 bits (164), Expect = 9e-12
Identities = 35/74 (47%), Positives = 38/74 (51%)
Query: 43 GARTDGGDALSEQSGAPPPSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEP 102
G R G G PP ++G QG G GKPG PG G PG GP GP G KGEP
Sbjct: 370 GRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEP 429
Query: 103 GKPGPPGLPGAGGS 116
G G PG PG G+
Sbjct: 430 GFTGRPGGPGVAGA 443
Score = 67.4 bits (163), Expect = 1e-11
Identities = 36/66 (54%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 55 QSGAPPPSTLVQGPQG--KPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPG 112
Q GAP P L GP G KPG G PG PG G+ GPPG GP GE G G GPPG+ G
Sbjct: 221 QGGAPGPPGL-PGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDG 279
Query: 113 AGGSGA 118
G GA
Sbjct: 280 VGVPGA 285
Score = 67.4 bits (163), Expect = 1e-11
Identities = 40/105 (38%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 37 ARGPGAGARTDGGDALSEQSGAPPPSTLV--QGPQGKPGRTGKPGPPGPPGDPGPPGPVG 94
A GP G + + G P + + +G G PG+ G GP G PG GP GP+G
Sbjct: 416 AHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIG 475
Query: 95 PPGEKGEPGKPGPPGLPGAGGSGAISTATYTTVPRVAFYAGLKNP 139
P G G G+PG PG PG G +G TA T P V G+ P
Sbjct: 476 PQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGP 520
Score = 66.2 bits (160), Expect = 3e-11
Identities = 51/136 (37%), Positives = 56/136 (41%), Gaps = 18/136 (13%)
Query: 1 MLLVLVVLIPVLVSSGGPEGHYEMLGTCRMVCDPYPARGPGAGARTDGGDALSEQSGAPP 60
+LLVLV+ SSGG G + + P G R G L P
Sbjct: 14 LLLVLVLGCGPRASSGGGAGGAAGYAPVKYI-QPMQKGPVGPPFREGKGQYLEMPLPLLP 72
Query: 61 PSTLVQ-GPQGKPGRTGKPGPPGPPGDPG--------PPGPVGPPG--------EKGEPG 103
+ GP GKPG G PGPPG PG PG PGP GPPG G PG
Sbjct: 73 MDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPG 132
Query: 104 KPGPPGLPGAGGSGAI 119
K GPPG PG G I
Sbjct: 133 KVGPPGQPGLRGEPGI 148
Score = 64.7 bits (156), Expect = 8e-11
Identities = 45/109 (41%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 17 GPEGHYEMLGTCRMVCDPYPARGPGA-------GARTDGGDALSEQSGAPPP---STLVQ 66
GP G Y M G D PA PG G + G+ + G PP S +
Sbjct: 311 GPTG-YGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLP 369
Query: 67 GPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGG 115
G +G PG G+ GP GPPG PG G GP G G+PG PG GLPGA G
Sbjct: 370 GRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHG 418
Score = 64.3 bits (155), Expect = 1e-10
Identities = 36/76 (47%), Positives = 40/76 (52%), Gaps = 20/76 (26%)
Query: 60 PPSTLVQGPQGKPGRTGKPGPPGPPG--------DPGPPGPVGPPGE---KGEPG----- 103
PP + GKPG G+PGP GPPG PG PG VGPPG+ +GEPG
Sbjct: 93 PPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQ 152
Query: 104 ----KPGPPGLPGAGG 115
PGPPGLPG G
Sbjct: 153 GLRGPPGPPGLPGPSG 168
Score = 64.3 bits (155), Expect = 1e-10
Identities = 44/98 (44%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 33 DPYPARGPGA-GARTDGGDALSEQSGAP--PPSTLVQGPQGKPGRTG--KPGP---PGPP 84
+P P PG G R GD Q G P P GP G PG G KPG PG P
Sbjct: 189 EPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAP 248
Query: 85 GDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAISTA 122
GD G GP G PG +GEPG GP G PG G G A
Sbjct: 249 GDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAA 286
Score = 62.8 bits (151), Expect = 3e-10
Identities = 39/100 (39%), Positives = 43/100 (43%), Gaps = 20/100 (20%)
Query: 41 GAGARTDGGDALSEQSGAPPPS---TLVQGPQGKPGRTGK---------------PGPPG 82
G G R G +G P + +GP G P R GK G PG
Sbjct: 21 GCGPRASSGGGAGGAAGYAPVKYIQPMQKGPVGPPFREGKGQYLEMPLPLLPMDLKGEPG 80
Query: 83 PPGDPGPPGPVGPPGEKGEP--GKPGPPGLPGAGGSGAIS 120
PPG PGP GP GPPG G+P GKPG G PG G S
Sbjct: 81 PPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFS 120
Score = 60.8 bits (146), Expect = 1e-09
Identities = 33/64 (51%), Positives = 35/64 (54%), Gaps = 13/64 (20%)
Query: 67 GPQGKPGRTGK--PGPPGPPGDPGPPGPVGPPGEKGEPGKP-----------GPPGLPGA 113
GP G PG +G PG PG G PGPPG G PG +GEPG P G PGLPGA
Sbjct: 159 GPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGA 218
Query: 114 GGSG 117
G G
Sbjct: 219 PGQG 222
Score = 60.1 bits (144), Expect = 2e-09
Identities = 47/137 (34%), Positives = 53/137 (38%), Gaps = 31/137 (22%)
Query: 34 PYPARGPGAGARTDGGDALSEQSGAPPPSTLVQGPQGKPG--------------RTGKPG 79
P P PG T G ++ PP GPQG+PG + G PG
Sbjct: 158 PGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPG 217
Query: 80 PPGPPGDPGPPGPVGP--------------PGEKGE---PGKPGPPGLPGAGGSGAISTA 122
PG G PGPPG GP PG+KGE PG PGP G PGA G
Sbjct: 218 APGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGV 277
Query: 123 TYTTVPRVAFYAGLKNP 139
VP A G + P
Sbjct: 278 DGVGVPGAAGLPGPQGP 294
Score = 59.7 bits (143), Expect = 2e-09
Identities = 44/108 (40%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Query: 16 GGPEGHYEMLGTCRMVCDPYPA--RGPGA-----GARTDGGDA-LSEQSGAPPPSTLVQG 67
GGP G G P P GPG G R D G + L+ + G P L G
Sbjct: 357 GGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGL-PG 415
Query: 68 PQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGG 115
G PG TG G PG G PG PG G G+KG+ G PG PGL G G
Sbjct: 416 AHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSG 463
Score = 58.2 bits (139), Expect = 7e-09
Identities = 30/60 (50%), Positives = 33/60 (55%), Gaps = 11/60 (18%)
Query: 67 GPQGKPGRTGKPGPPGPPGDP---------GPPGPVGPPGEKG--EPGKPGPPGLPGAGG 115
GP G PG+ G PG PG G+P GPPGP G PG G PGKPG G+PG G
Sbjct: 126 GPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPG 185
Score = 57.4 bits (137), Expect = 1e-08
Identities = 43/112 (38%), Positives = 47/112 (41%), Gaps = 34/112 (30%)
Query: 34 PYPARGPGA----GARTDGGDALSEQSGAPPPSTLVQGPQGKPGRTGKPGPPG------- 82
P P PGA G G + +G P P QGP G G G GPPG
Sbjct: 260 PGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGP----QGPSGAKGEPGTRGPPGLIGPTGY 315
Query: 83 -PPGDPGPPGPVGP------------PGEKGEPGKP------GPPGLPGAGG 115
PG PGP G GP PGE GEPG+ GPPGLPG+ G
Sbjct: 316 GMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAG 367
Score = 56.6 bits (135), Expect = 2e-08
Identities = 37/92 (40%), Positives = 41/92 (44%), Gaps = 14/92 (15%)
Query: 38 RGPGAGARTDGGDALSEQSGAPPPSTLVQ--GPQGKPGRTGKPGPPG---PPGDP----- 87
+G G G L + G P P GP G PG G GP G PG P
Sbjct: 354 QGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGL 413
Query: 88 ----GPPGPVGPPGEKGEPGKPGPPGLPGAGG 115
GPPGP GP GE G G+PG PG+ GA G
Sbjct: 414 PGAHGPPGPTGPKGEPGFTGRPGGPGVAGALG 445
>gi|122937273 hypothetical protein LOC131149 [Homo sapiens]
Length = 477
Score = 120 bits (301), Expect = 1e-27
Identities = 85/234 (36%), Positives = 116/234 (49%), Gaps = 14/234 (5%)
Query: 32 CDPYPARGPGAGARTDGGDALSEQSGAPPPSTLVQGPQGKPGRTGKPGPPGPPGDPGPPG 91
C RG G G + +GG + S G G PG G PG G G+ GPPG
Sbjct: 244 CGDSGERG-GKGQKGEGGMKGEKGSKGDSGMEGKSGRNGLPGAKGDPGIKGEKGELGPPG 302
Query: 92 PVGPPGEKGEPGKPGPPGLPGAGGSGAI--STATYTTVPRVAFYAGLKNPHEGYEV-LKF 148
+GP G KG+ G G G G GS S VPR AF AGL P + +KF
Sbjct: 303 LLGPTGPKGDIGNKGVRGPTGKKGSRGFKGSKGELARVPRSAFSAGLSKPFPPPNIPIKF 362
Query: 149 DDVVTNLGNNYDAASGKFTCNIPGTYFFTYHVLMRGGDG-TSMWADLCKNGQVRASAIAQ 207
+ ++ N NY +GKF C+IPGTY F+YH+ +RG S+ A K + R + Q
Sbjct: 363 EKILYNDQGNYSPVTGKFNCSIPGTYVFSYHITVRGRPARISLVAQNKKQFKSRETLYGQ 422
Query: 208 DADQNYDYASNSVILHLDAGDEVFIKLDGGKAHGG---NSNKYSTFSGFIIYSD 258
+ DQ AS VIL L AGD+V++++ K G ++ S F+GF++Y +
Sbjct: 423 EIDQ----ASLLVILKLSAGDQVWLEV--SKDWNGVYVSAEDDSIFTGFLLYPE 470
Score = 61.2 bits (147), Expect = 8e-10
Identities = 32/66 (48%), Positives = 38/66 (57%), Gaps = 15/66 (22%)
Query: 65 VQGPQGKPGRTGKPGPPGPPGD---PGPPGPVGP------------PGEKGEPGKPGPPG 109
V G +G+PG TG+PGP G G+ PGPPG VGP GE+G+ G PG PG
Sbjct: 108 VPGQKGEPGETGQPGPKGEAGNLGIPGPPGVVGPQGPRGYKGEKGLKGERGDQGVPGYPG 167
Query: 110 LPGAGG 115
PGA G
Sbjct: 168 KPGAQG 173
Score = 56.2 bits (134), Expect = 3e-08
Identities = 35/89 (39%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 28 CRMVCDPYPA-RGPGAGARTDGGDALSEQSGAPPPSTLVQGPQGKPGRTGKPGPPGPPGD 86
C C P P +G G + G P P +V GPQG G G+ G G GD
Sbjct: 101 CCDCCSPVPGQKGEPGETGQPGPKGEAGNLGIPGPPGVV-GPQGPRGYKGEKGLKGERGD 159
Query: 87 PGPPGPVGPPGEKGEPGKPGPPGLPGAGG 115
G PG G PG +GEPG G G G GG
Sbjct: 160 QGVPGYPGKPGAQGEPGPKGDKGNIGLGG 188
Score = 56.2 bits (134), Expect = 3e-08
Identities = 28/57 (49%), Positives = 31/57 (54%)
Query: 60 PPSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGS 116
P T GP+G+ G G PGPPG G GP G G G KGE G G PG PG G+
Sbjct: 115 PGETGQPGPKGEAGNLGIPGPPGVVGPQGPRGYKGEKGLKGERGDQGVPGYPGKPGA 171
Score = 44.7 bits (104), Expect = 8e-05
Identities = 37/112 (33%), Positives = 44/112 (39%), Gaps = 20/112 (17%)
Query: 17 GPEGHYEMLGTCRMVCDPYPARGPGAGARTDGGDALSEQSGAPPPSTLVQGPQGKPGRTG 76
GP+G LG + P GP G L + G V G GKPG G
Sbjct: 122 GPKGEAGNLG----IPGPPGVVGPQGPRGYKGEKGLKGERGDQG----VPGYPGKPGAQG 173
Query: 77 KPGPPGPPGDPGPPGPVG------------PPGEKGEPGKPGPPGLPGAGGS 116
+PGP G G+ G G G GEKG+ G G PGL G G+
Sbjct: 174 EPGPKGDKGNIGLGGVKGQKGSKGDTCGNCTKGEKGDQGAMGSPGLHGGPGA 225
>gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 120 bits (301), Expect = 1e-27
Identities = 88/267 (32%), Positives = 121/267 (45%), Gaps = 53/267 (19%)
Query: 39 GPGAGARTDGGDALSEQSGAPP---PSTLVQGPQGKPGRTGKPGPPGPPGDPG------- 88
GP G L G P PS + GP G PG G+PG PGPPG PG
Sbjct: 480 GPKGEPGIPGDQGLQGPPGIPGIGGPSGPI-GPPGIPGPKGEPGLPGPPGFPGIGKPGVA 538
Query: 89 ----PPGPVGPPGEKGEPGKPGPPGLPGAGGSGAISTATYTT----VPRVAF-YAGLKNP 139
PPG G G +G+PG PGPPG PG G A+ T +P + G+K P
Sbjct: 539 GLHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPP 598
Query: 140 H-----------EGYEV-----------------LKFDDVVTNLGNNYDAASGKFTCNIP 171
H YE+ +KF+ ++ N NY+ +G FTC +P
Sbjct: 599 HAYGAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFNKLLYNGRQNYNPQTGIFTCEVP 658
Query: 172 GTYFFTYHVLMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVF 231
G Y+F YHV +GG ++W L KN + + D AS S +L L GD VF
Sbjct: 659 GVYYFAYHVHCKGG---NVWVALFKNNEPVMYTYDEYKKGFLDQASGSAVLLLRPGDRVF 715
Query: 232 IKLDGGKAHGGNSNKY--STFSGFIIY 256
+++ +A G + +Y S+FSG+++Y
Sbjct: 716 LQMPSEQAAGLYAGQYVHSSFSGYLLY 742
Score = 71.6 bits (174), Expect = 6e-13
Identities = 38/71 (53%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 55 QSGAP--PPSTLVQGPQGKPGRTGKPGPPGPPGDPG---PPGPVGPPG---EKGEPGKPG 106
Q G P P + GP+G+PG G G GPPG PG P GP+GPPG KGEPG PG
Sbjct: 466 QKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPG 525
Query: 107 PPGLPGAGGSG 117
PPG PG G G
Sbjct: 526 PPGFPGIGKPG 536
Score = 71.2 bits (173), Expect = 8e-13
Identities = 45/108 (41%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 16 GGPEGHYEMLGTCRMVCDPYPARGPGA----GARTDGGDALSEQSGAPPPSTLVQGPQGK 71
GGP G + G P P PGA G + +GG + P +QG GK
Sbjct: 386 GGPPGEPGLPGI------PGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGK 439
Query: 72 PGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAI 119
PG G+ GPPG G PGP GP G G+KG PG PG PGL G G I
Sbjct: 440 PGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGI 487
Score = 70.1 bits (170), Expect = 2e-12
Identities = 46/112 (41%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Query: 10 PVLVSSGGPEGHYEMLGTCRMVCDPYPARGPGAGARTDGGDALSEQSGAP----PPSTLV 65
P L GP+G G + P RGP G + G G P PP +
Sbjct: 213 PGLPGQPGPKGDRGPKG----LPGPQGLRGP-KGDKGFGMPGAPGVKGPPGMHGPPGPVG 267
Query: 66 QGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSG 117
GKPG TG PGP GP G PG PG GP G G PG GPPG+PG G G
Sbjct: 268 LPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPG 319
Score = 67.4 bits (163), Expect = 1e-11
Identities = 38/82 (46%), Positives = 41/82 (50%), Gaps = 24/82 (29%)
Query: 56 SGAPPPSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPG------------------ 97
+G P P QGP GKPG G+PGP GP G PG GP G PG
Sbjct: 277 TGFPGP----QGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGG 332
Query: 98 --EKGEPGKPGPPGLPGAGGSG 117
E+G PG PGPPGLPG G G
Sbjct: 333 KGEQGLPGLPGPPGLPGIGKPG 354
Score = 63.2 bits (152), Expect = 2e-10
Identities = 41/83 (49%), Positives = 44/83 (53%), Gaps = 19/83 (22%)
Query: 40 PGA-GARTDGGDALSEQSGAPPPSTLVQGPQGKPGRTGKPGPPGPPGD---PGPPG---- 91
PGA G R + G GAP + GP G+PG G PGP GPPG PGP G
Sbjct: 368 PGALGPRGEKGPI-----GAPG----IGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGI 418
Query: 92 --PVGPPGEKGEPGKPGPPGLPG 112
P GPPG KGEPG G PG PG
Sbjct: 419 VGPQGPPGPKGEPGLQGFPGKPG 441
Score = 60.5 bits (145), Expect = 1e-09
Identities = 34/82 (41%), Positives = 39/82 (47%)
Query: 34 PYPARGPGAGARTDGGDALSEQSGAPPPSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPV 93
P P PG G G G P + +G +G G G GPPG PG PG PGP+
Sbjct: 342 PGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPM 401
Query: 94 GPPGEKGEPGKPGPPGLPGAGG 115
GPPG G PG G G+ G G
Sbjct: 402 GPPGAIGFPGPKGEGGIVGPQG 423
Score = 59.3 bits (142), Expect = 3e-09
Identities = 45/125 (36%), Positives = 54/125 (43%), Gaps = 25/125 (20%)
Query: 18 PEGHYEMLGTCRMVCDPYPARG---PGAGARTDGGDALSEQSGAPP-----PSTLVQGPQ 69
P+ E+ RM + P +G P A R + G PP P + G +
Sbjct: 87 PQYMKEIQPAPRMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIK 146
Query: 70 GKPGRTGKPG--PPGPPGDPGPPGPVGPPGEKGEPGK---------------PGPPGLPG 112
GKPG G PG PG PG PG PG +G PG KGE G+ PGP GLPG
Sbjct: 147 GKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPG 206
Query: 113 AGGSG 117
G G
Sbjct: 207 IGKPG 211
Score = 58.5 bits (140), Expect = 5e-09
Identities = 43/115 (37%), Positives = 50/115 (43%), Gaps = 11/115 (9%)
Query: 9 IPVLVSSGGPEGHYEMLGTCRMVCDPYPARGPGAGARTDGGDALSEQSGAPPPSTLVQGP 68
IP + GP+G Y +G M P PGA + ++ P + GP
Sbjct: 142 IPGIKGKPGPQG-YPGVGKPGM---PGMPGKPGAMGMPGAKGEIGQKGEIGPMG--IPGP 195
Query: 69 QGKPGR-----TGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGA 118
QG PG GKPG PG PG PGP G GP G G G GP G G G GA
Sbjct: 196 QGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGA 250
Score = 57.4 bits (137), Expect = 1e-08
Identities = 29/53 (54%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 66 QGPQGKPG---RTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGG 115
+GP G PG G+PG PG PG GPPG +G PG KGE G GP G PG G
Sbjct: 377 KGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKG 429
Score = 55.1 bits (131), Expect = 6e-08
Identities = 38/98 (38%), Positives = 41/98 (41%), Gaps = 25/98 (25%)
Query: 67 GPQGKPGRTGKPGPPGPPGDP------------------GPPGPVGPPGEKGEPGKP--- 105
G G PG G PG PGP G P GPPGP G PG +G PGKP
Sbjct: 384 GIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFL 443
Query: 106 ---GPPGLPGAGGS-GAISTATYTTVPRVAFYAGLKNP 139
GPPG+ G G G A VP + GL P
Sbjct: 444 GEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGP 481
Score = 52.8 bits (125), Expect = 3e-07
Identities = 43/109 (39%), Positives = 46/109 (42%), Gaps = 32/109 (29%)
Query: 40 PGAGARTDGGDALSEQSGAPPPSTL-----VQGPQGKPGRTGKPGPPGPPGDPGP---PG 91
PG G G D + Q G P + GP G PG GKPG PGP GD G PG
Sbjct: 313 PGIGK--PGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPG-IGKPGFPGPKGDRGMGGVPG 369
Query: 92 PVGPPGEKG------------EPGKPGPP---------GLPGAGGSGAI 119
+GP GEKG EPG PG P G PG G G I
Sbjct: 370 ALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGI 418
>gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 120 bits (301), Expect = 1e-27
Identities = 88/267 (32%), Positives = 121/267 (45%), Gaps = 53/267 (19%)
Query: 39 GPGAGARTDGGDALSEQSGAPP---PSTLVQGPQGKPGRTGKPGPPGPPGDPG------- 88
GP G L G P PS + GP G PG G+PG PGPPG PG
Sbjct: 480 GPKGEPGIPGDQGLQGPPGIPGIGGPSGPI-GPPGIPGPKGEPGLPGPPGFPGIGKPGVA 538
Query: 89 ----PPGPVGPPGEKGEPGKPGPPGLPGAGGSGAISTATYTT----VPRVAF-YAGLKNP 139
PPG G G +G+PG PGPPG PG G A+ T +P + G+K P
Sbjct: 539 GLHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPP 598
Query: 140 H-----------EGYEV-----------------LKFDDVVTNLGNNYDAASGKFTCNIP 171
H YE+ +KF+ ++ N NY+ +G FTC +P
Sbjct: 599 HAYGAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFNKLLYNGRQNYNPQTGIFTCEVP 658
Query: 172 GTYFFTYHVLMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVF 231
G Y+F YHV +GG ++W L KN + + D AS S +L L GD VF
Sbjct: 659 GVYYFAYHVHCKGG---NVWVALFKNNEPVMYTYDEYKKGFLDQASGSAVLLLRPGDRVF 715
Query: 232 IKLDGGKAHGGNSNKY--STFSGFIIY 256
+++ +A G + +Y S+FSG+++Y
Sbjct: 716 LQMPSEQAAGLYAGQYVHSSFSGYLLY 742
Score = 71.6 bits (174), Expect = 6e-13
Identities = 38/71 (53%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 55 QSGAP--PPSTLVQGPQGKPGRTGKPGPPGPPGDPG---PPGPVGPPG---EKGEPGKPG 106
Q G P P + GP+G+PG G G GPPG PG P GP+GPPG KGEPG PG
Sbjct: 466 QKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPG 525
Query: 107 PPGLPGAGGSG 117
PPG PG G G
Sbjct: 526 PPGFPGIGKPG 536
Score = 71.2 bits (173), Expect = 8e-13
Identities = 45/108 (41%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 16 GGPEGHYEMLGTCRMVCDPYPARGPGA----GARTDGGDALSEQSGAPPPSTLVQGPQGK 71
GGP G + G P P PGA G + +GG + P +QG GK
Sbjct: 386 GGPPGEPGLPGI------PGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGK 439
Query: 72 PGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAI 119
PG G+ GPPG G PGP GP G G+KG PG PG PGL G G I
Sbjct: 440 PGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGI 487
Score = 70.1 bits (170), Expect = 2e-12
Identities = 46/112 (41%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Query: 10 PVLVSSGGPEGHYEMLGTCRMVCDPYPARGPGAGARTDGGDALSEQSGAP----PPSTLV 65
P L GP+G G + P RGP G + G G P PP +
Sbjct: 213 PGLPGQPGPKGDRGPKG----LPGPQGLRGP-KGDKGFGMPGAPGVKGPPGMHGPPGPVG 267
Query: 66 QGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSG 117
GKPG TG PGP GP G PG PG GP G G PG GPPG+PG G G
Sbjct: 268 LPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPG 319
Score = 67.4 bits (163), Expect = 1e-11
Identities = 38/82 (46%), Positives = 41/82 (50%), Gaps = 24/82 (29%)
Query: 56 SGAPPPSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPG------------------ 97
+G P P QGP GKPG G+PGP GP G PG GP G PG
Sbjct: 277 TGFPGP----QGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGG 332
Query: 98 --EKGEPGKPGPPGLPGAGGSG 117
E+G PG PGPPGLPG G G
Sbjct: 333 KGEQGLPGLPGPPGLPGIGKPG 354
Score = 63.2 bits (152), Expect = 2e-10
Identities = 41/83 (49%), Positives = 44/83 (53%), Gaps = 19/83 (22%)
Query: 40 PGA-GARTDGGDALSEQSGAPPPSTLVQGPQGKPGRTGKPGPPGPPGD---PGPPG---- 91
PGA G R + G GAP + GP G+PG G PGP GPPG PGP G
Sbjct: 368 PGALGPRGEKGPI-----GAPG----IGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGI 418
Query: 92 --PVGPPGEKGEPGKPGPPGLPG 112
P GPPG KGEPG G PG PG
Sbjct: 419 VGPQGPPGPKGEPGLQGFPGKPG 441
Score = 60.5 bits (145), Expect = 1e-09
Identities = 34/82 (41%), Positives = 39/82 (47%)
Query: 34 PYPARGPGAGARTDGGDALSEQSGAPPPSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPV 93
P P PG G G G P + +G +G G G GPPG PG PG PGP+
Sbjct: 342 PGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPM 401
Query: 94 GPPGEKGEPGKPGPPGLPGAGG 115
GPPG G PG G G+ G G
Sbjct: 402 GPPGAIGFPGPKGEGGIVGPQG 423
Score = 59.3 bits (142), Expect = 3e-09
Identities = 45/125 (36%), Positives = 54/125 (43%), Gaps = 25/125 (20%)
Query: 18 PEGHYEMLGTCRMVCDPYPARG---PGAGARTDGGDALSEQSGAPP-----PSTLVQGPQ 69
P+ E+ RM + P +G P A R + G PP P + G +
Sbjct: 87 PQYMKEIQPAPRMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIK 146
Query: 70 GKPGRTGKPG--PPGPPGDPGPPGPVGPPGEKGEPGK---------------PGPPGLPG 112
GKPG G PG PG PG PG PG +G PG KGE G+ PGP GLPG
Sbjct: 147 GKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPG 206
Query: 113 AGGSG 117
G G
Sbjct: 207 IGKPG 211
Score = 58.5 bits (140), Expect = 5e-09
Identities = 43/115 (37%), Positives = 50/115 (43%), Gaps = 11/115 (9%)
Query: 9 IPVLVSSGGPEGHYEMLGTCRMVCDPYPARGPGAGARTDGGDALSEQSGAPPPSTLVQGP 68
IP + GP+G Y +G M P PGA + ++ P + GP
Sbjct: 142 IPGIKGKPGPQG-YPGVGKPGM---PGMPGKPGAMGMPGAKGEIGQKGEIGPMG--IPGP 195
Query: 69 QGKPGR-----TGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGA 118
QG PG GKPG PG PG PGP G GP G G G GP G G G GA
Sbjct: 196 QGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGA 250
Score = 57.4 bits (137), Expect = 1e-08
Identities = 29/53 (54%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 66 QGPQGKPG---RTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGG 115
+GP G PG G+PG PG PG GPPG +G PG KGE G GP G PG G
Sbjct: 377 KGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKG 429
Score = 55.1 bits (131), Expect = 6e-08
Identities = 38/98 (38%), Positives = 41/98 (41%), Gaps = 25/98 (25%)
Query: 67 GPQGKPGRTGKPGPPGPPGDP------------------GPPGPVGPPGEKGEPGKP--- 105
G G PG G PG PGP G P GPPGP G PG +G PGKP
Sbjct: 384 GIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFL 443
Query: 106 ---GPPGLPGAGGS-GAISTATYTTVPRVAFYAGLKNP 139
GPPG+ G G G A VP + GL P
Sbjct: 444 GEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGP 481
Score = 52.8 bits (125), Expect = 3e-07
Identities = 43/109 (39%), Positives = 46/109 (42%), Gaps = 32/109 (29%)
Query: 40 PGAGARTDGGDALSEQSGAPPPSTL-----VQGPQGKPGRTGKPGPPGPPGDPGP---PG 91
PG G G D + Q G P + GP G PG GKPG PGP GD G PG
Sbjct: 313 PGIGK--PGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPG-IGKPGFPGPKGDRGMGGVPG 369
Query: 92 PVGPPGEKG------------EPGKPGPP---------GLPGAGGSGAI 119
+GP GEKG EPG PG P G PG G G I
Sbjct: 370 ALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGI 418
>gi|7705753 complement component 1, q subcomponent, A chain
precursor [Homo sapiens]
Length = 245
Score = 119 bits (298), Expect = 3e-27
Identities = 80/218 (36%), Positives = 102/218 (46%), Gaps = 27/218 (12%)
Query: 48 GGDALSEQSGAPPPSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGP 107
G L + G P + G QG G G+PGP G PG G PGP GP G +G PG G
Sbjct: 43 GRPGLKGEQGEPGAPGIRTGIQGLKGDQGEPGPSGNPGKVGYPGPSGPLGARGIPGIKGT 102
Query: 108 PGLPGAGGSGAISTATYTTVPRVAFYAGLKNPHEGYEVLKFDDVVTNLGNNYDAASGKFT 167
G PG PR AF A +NP G V+ FD V+TN Y SG+F
Sbjct: 103 KGSPG----------NIKDQPRPAFSAIRRNPPMGGNVVIFDTVITNQEEPYQNHSGRFV 152
Query: 168 CNIPGTYFFTYHVLMRGGDGTSMWADLC------KNGQVRASAIAQDADQN--YDYASNS 219
C +PG Y+FT+ VL S W ++C GQVR S D + S
Sbjct: 153 CTVPGYYYFTFQVL-------SQW-EICLSIVSSSRGQVRRSLGFCDTTNKGLFQVVSGG 204
Query: 220 VILHLDAGDEVFIKLDGGKAH-GGNSNKYSTFSGFIIY 256
++L L GD+V+++ D K H S S FSGF+I+
Sbjct: 205 MVLQLQQGDQVWVEKDPKKGHIYQGSEADSVFSGFLIF 242
>gi|62739183 C1q and tumor necrosis factor related protein 3 isoform
b [Homo sapiens]
Length = 319
Score = 111 bits (277), Expect = 7e-25
Identities = 76/222 (34%), Positives = 108/222 (48%), Gaps = 25/222 (11%)
Query: 53 SEQSGAPPP--STLVQGPQGKPGRTGKPGPPGPPGDP---------GPPGPVGPPGEKGE 101
S Q+G PP S G G G PGPPGPPG P G G G GEKG+
Sbjct: 102 SPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGD 161
Query: 102 PGKPGPPGLPGAGGSGAISTATYTTVP---RVAFYAGL----KNPHEGYEVLKFDDVVTN 154
G GP G G G Y +P ++AF A L N + G + F V TN
Sbjct: 162 KGDLGPRG--ERGQHGPKGEKGYPGIPPELQIAFMASLATHFSNQNSG---IIFSSVETN 216
Query: 155 LGNNYDAASGKFTCNIPGTYFFTYHVLMRGGDGTSMWADLCKNGQVRASAIAQDADQNYD 214
+GN +D +G+F + G YFFT+ +M+ D ++ L NG S + + D
Sbjct: 217 IGNFFDVMTGRFGAPVSGVYFFTFS-MMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSD 275
Query: 215 YASNSVILHLDAGDEVFIKLDGGKAHGGNSNKYSTFSGFIIY 256
+SN +L L GDEV++++ G H G+ ++STF+GF+++
Sbjct: 276 TSSNHAVLKLAKGDEVWLRMGNGALH-GDHQRFSTFAGFLLF 316
>gi|56786155 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 108 bits (270), Expect = 5e-24
Identities = 75/230 (32%), Positives = 106/230 (46%), Gaps = 37/230 (16%)
Query: 40 PGAGARTDGGDALSEQSGAP--PPSTLVQGPQGK------PGRTGKPGPPGPPGDPGPPG 91
PGA + DG D L G P P ++GP+G+ PG GK GP GPPG PG PG
Sbjct: 42 PGAPGK-DGYDGLPGPKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPG 100
Query: 92 PVGPPGEKGEPGKPGPPGLPGAGGSGAISTATYTTVPRVAFYAGLKNPHEGYEVLKFDDV 151
P+G PGE GE G+ ++ T T T P +++F+ V
Sbjct: 101 PMGIPGEPGEEGRYKQK-------FQSVFTVTRQT----------HQPPAPNSLIRFNAV 143
Query: 152 VTNLGNNYDAASGKFTCNIPGTYFFTYHVLMRGGDGTSMWADLC---KNGQVRASAIAQD 208
+TN +YD ++GKFTC +PG Y+F YH S A+LC V+
Sbjct: 144 LTNPQGDYDTSTGKFTCKVPGLYYFVYH--------ASHTANLCVLLYRSGVKVVTFCGH 195
Query: 209 ADQNYDYASNSVILHLDAGDEVFIKLDGGKAHGGNSNKYSTFSGFIIYSD 258
+ S V+L L G+EV++ ++ G S FSGF+++ D
Sbjct: 196 TSKTNQVNSGGVLLRLQVGEEVWLAVNDYYDMVGIQGSDSVFSGFLLFPD 245
>gi|166235903 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 108 bits (270), Expect = 5e-24
Identities = 75/230 (32%), Positives = 106/230 (46%), Gaps = 37/230 (16%)
Query: 40 PGAGARTDGGDALSEQSGAP--PPSTLVQGPQGK------PGRTGKPGPPGPPGDPGPPG 91
PGA + DG D L G P P ++GP+G+ PG GK GP GPPG PG PG
Sbjct: 42 PGAPGK-DGYDGLPGPKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPG 100
Query: 92 PVGPPGEKGEPGKPGPPGLPGAGGSGAISTATYTTVPRVAFYAGLKNPHEGYEVLKFDDV 151
P+G PGE GE G+ ++ T T T P +++F+ V
Sbjct: 101 PMGIPGEPGEEGRYKQK-------FQSVFTVTRQT----------HQPPAPNSLIRFNAV 143
Query: 152 VTNLGNNYDAASGKFTCNIPGTYFFTYHVLMRGGDGTSMWADLC---KNGQVRASAIAQD 208
+TN +YD ++GKFTC +PG Y+F YH S A+LC V+
Sbjct: 144 LTNPQGDYDTSTGKFTCKVPGLYYFVYH--------ASHTANLCVLLYRSGVKVVTFCGH 195
Query: 209 ADQNYDYASNSVILHLDAGDEVFIKLDGGKAHGGNSNKYSTFSGFIIYSD 258
+ S V+L L G+EV++ ++ G S FSGF+++ D
Sbjct: 196 TSKTNQVNSGGVLLRLQVGEEVWLAVNDYYDMVGIQGSDSVFSGFLLFPD 245
>gi|13569919 C1q and tumor necrosis factor related protein 3 isoform
a [Homo sapiens]
Length = 246
Score = 108 bits (270), Expect = 5e-24
Identities = 69/198 (34%), Positives = 101/198 (51%), Gaps = 14/198 (7%)
Query: 66 QGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAISTATYT 125
QGP G PG G PG G G+ G G G GEKG+ G GP G G G Y
Sbjct: 53 QGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRG--ERGQHGPKGEKGYP 110
Query: 126 TVP---RVAFYAGL----KNPHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFTY 178
+P ++AF A L N + G + F V TN+GN +D +G+F + G YFFT+
Sbjct: 111 GIPPELQIAFMASLATHFSNQNSG---IIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTF 167
Query: 179 HVLMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFIKLDGGK 238
+M+ D ++ L NG S + + D +SN +L L GDEV++++ G
Sbjct: 168 S-MMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGNGA 226
Query: 239 AHGGNSNKYSTFSGFIIY 256
H G+ ++STF+GF+++
Sbjct: 227 LH-GDHQRFSTFAGFLLF 243
>gi|14149712 C1q and tumor necrosis factor related protein 5
precursor [Homo sapiens]
Length = 243
Score = 105 bits (263), Expect = 3e-23
Identities = 75/199 (37%), Positives = 98/199 (49%), Gaps = 12/199 (6%)
Query: 67 GPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAISTATYTT 126
G QG PGR G+ G G PG PG G G PG G G PGP G AG +G A +
Sbjct: 42 GSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRG--EAGPAGPTGPAGECS 99
Query: 127 V-PRVAFYAGLKN---PHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFTYHVLM 182
V PR AF A P L FD V+ N +YDA +GKFTC +PG Y+F H +
Sbjct: 100 VPPRSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATV 159
Query: 183 RGGDGTSMWADLCKNGQVRASAIAQDADQNYDYA-SNSVILHLDAGDEVFIKLDGGKAHG 241
S+ DL KNG+ AS + S ++ L+ D+V++++ G G
Sbjct: 160 Y---RASLQFDLVKNGESIASFFQFFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIG 216
Query: 242 --GNSNKYSTFSGFIIYSD 258
+ STFSGF++YSD
Sbjct: 217 IYASIKTDSTFSGFLVYSD 235
>gi|5901944 elastin microfibril interfacer 1 [Homo sapiens]
Length = 1016
Score = 105 bits (262), Expect = 4e-23
Identities = 71/201 (35%), Positives = 97/201 (48%), Gaps = 19/201 (9%)
Query: 73 GRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAISTATYTTVPRVAF 132
G G+ GPPGPPG GPPGP GPPG G+ G+ GP G PG G + A VP+VAF
Sbjct: 814 GPAGEAGPPGPPGLQGPPGPAGPPGSPGKDGQEGPIGPPGPQGEQGVEGAPAAPVPQVAF 873
Query: 133 YAGLKNPHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFTYHVLMRGGDGTSMWA 192
A L P + FD V+ N G YD +G FT + G Y + ++ G + A
Sbjct: 874 SAALSLPRSEPGTVPFDRVLLNDGGYYDPETGVFTAPLAGRYLLS--AVLTGHRHEKVEA 931
Query: 193 DLCKNGQ----VRASAIAQDADQNYDYASN----------SVILHLDAGDEVFIKLDGGK 238
L ++ Q V + + +N A + S+IL L AGD V + L G+
Sbjct: 932 VLSRSNQGVARVDSGGYEPEGLENKPVAESQPSPGTLGVFSLILPLQAGDTVCVDLVMGQ 991
Query: 239 -AHGGNSNKYSTFSGFIIYSD 258
AH + + FSG ++Y D
Sbjct: 992 LAH--SEEPLTIFSGALLYGD 1010
>gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens]
Length = 1127
Score = 87.4 bits (215), Expect = 1e-17
Identities = 50/133 (37%), Positives = 78/133 (58%), Gaps = 5/133 (3%)
Query: 129 RVAFYAGLKN---PHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFTYHVLMRGG 185
RVAF A + P + + FD ++ NLG +D G+F C + GTY F +H+L
Sbjct: 997 RVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAV 1056
Query: 186 DGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFIKLDGGKAHGGNSN 245
+ ++ +L KN +V SA A D +++ ASN IL L GD+++++L G + G+S
Sbjct: 1057 N-VPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIY-GSSW 1114
Query: 246 KYSTFSGFIIYSD 258
KYSTFSG+++Y D
Sbjct: 1115 KYSTFSGYLLYQD 1127
>gi|50428931 C1q domain containing 1 isoform 3 [Homo sapiens]
Length = 793
Score = 87.4 bits (215), Expect = 1e-17
Identities = 50/133 (37%), Positives = 78/133 (58%), Gaps = 5/133 (3%)
Query: 129 RVAFYAGLKN---PHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFTYHVLMRGG 185
RVAF A + P + + FD ++ NLG +D G+F C + GTY F +H+L
Sbjct: 663 RVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAV 722
Query: 186 DGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFIKLDGGKAHGGNSN 245
+ ++ +L KN +V SA A D +++ ASN IL L GD+++++L G + G+S
Sbjct: 723 N-VPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIY-GSSW 780
Query: 246 KYSTFSGFIIYSD 258
KYSTFSG+++Y D
Sbjct: 781 KYSTFSGYLLYQD 793
>gi|23503235 C1q domain containing 1 isoform 2 [Homo sapiens]
Length = 1077
Score = 87.4 bits (215), Expect = 1e-17
Identities = 50/133 (37%), Positives = 78/133 (58%), Gaps = 5/133 (3%)
Query: 129 RVAFYAGLKN---PHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFTYHVLMRGG 185
RVAF A + P + + FD ++ NLG +D G+F C + GTY F +H+L
Sbjct: 947 RVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAV 1006
Query: 186 DGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFIKLDGGKAHGGNSN 245
+ ++ +L KN +V SA A D +++ ASN IL L GD+++++L G + G+S
Sbjct: 1007 N-VPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIY-GSSW 1064
Query: 246 KYSTFSGFIIYSD 258
KYSTFSG+++Y D
Sbjct: 1065 KYSTFSGYLLYQD 1077
>gi|116686136 C1q and tumor necrosis factor related protein 8 [Homo
sapiens]
Length = 252
Score = 84.3 bits (207), Expect = 9e-17
Identities = 77/262 (29%), Positives = 120/262 (45%), Gaps = 29/262 (11%)
Query: 2 LLVLVVLIPVLVSSGGPEGHYEMLGTCRMVCDPYPARGPGAGARTDGGDALSEQ--SGAP 59
LL+L +L+PV G P + CR PA PG AR D G P
Sbjct: 6 LLLLALLLPVGAWPGLPRR--PCVHCCR------PAWPPGPYARVSDRDLWRGDLWRGLP 57
Query: 60 P--PSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSG 117
P+ ++ +G+ G G G G G GPPG G G +G+ G+ GPPG
Sbjct: 58 RVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYA 117
Query: 118 AISTATYTTVPRVAFYAGLKNPHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFT 177
A S V GL + + ++ + FD + NL +D A+G+F C +PG YF +
Sbjct: 118 AFS---------VGRREGL-HSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLS 167
Query: 178 YHVLMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFIKL--- 234
+V + + + N + A AQ ++++ A S++L L AGD V++++
Sbjct: 168 LNV--HTWNYKETYLHIMLNRRPAAVLYAQPSERSVMQA-QSLMLLLAAGDAVWVRMFQR 224
Query: 235 DGGKA-HGGNSNKYSTFSGFII 255
D A +G + + Y TFSG ++
Sbjct: 225 DRDNAIYGEHGDLYITFSGHLV 246
>gi|32967300 C1q and tumor necrosis factor related protein 6 [Homo
sapiens]
Length = 278
Score = 82.4 bits (202), Expect = 4e-16
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 20/200 (10%)
Query: 63 TLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAISTA 122
T+++G +G PG G PG G G G PGP G G+KGE G PG P
Sbjct: 93 TILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQK--------RFF 144
Query: 123 TYTTVPRVAFYAGLKNPHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFTYHVLM 182
++ + A ++G E ++ L F+ V NL +D A+G+F + G YFF+ +V
Sbjct: 145 AFSVGRKTALHSG-----EDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNV-- 197
Query: 183 RGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFIKL----DGGK 238
+ + + N + AQ ++++ S SV+L L GD V+++L
Sbjct: 198 HSWNYKETYVHIMHNQKEAVILYAQPSERSI-MQSQSVMLDLAYGDRVWVRLFKRQRENA 256
Query: 239 AHGGNSNKYSTFSGFIIYSD 258
+ + + Y TFSG +I ++
Sbjct: 257 IYSNDFDTYITFSGHLIKAE 276
>gi|32967294 C1q and tumor necrosis factor related protein 6 [Homo
sapiens]
Length = 278
Score = 82.4 bits (202), Expect = 4e-16
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 20/200 (10%)
Query: 63 TLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAISTA 122
T+++G +G PG G PG G G G PGP G G+KGE G PG P
Sbjct: 93 TILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQK--------RFF 144
Query: 123 TYTTVPRVAFYAGLKNPHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFTYHVLM 182
++ + A ++G E ++ L F+ V NL +D A+G+F + G YFF+ +V
Sbjct: 145 AFSVGRKTALHSG-----EDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNV-- 197
Query: 183 RGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFIKL----DGGK 238
+ + + N + AQ ++++ S SV+L L GD V+++L
Sbjct: 198 HSWNYKETYVHIMHNQKEAVILYAQPSERSI-MQSQSVMLDLAYGDRVWVRLFKRQRENA 256
Query: 239 AHGGNSNKYSTFSGFIIYSD 258
+ + + Y TFSG +I ++
Sbjct: 257 IYSNDFDTYITFSGHLIKAE 276
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.140 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,859,910
Number of Sequences: 37866
Number of extensions: 1257904
Number of successful extensions: 46686
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 1048
Number of HSP's that attempted gapping in prelim test: 8404
Number of HSP's gapped (non-prelim): 12769
length of query: 258
length of database: 18,247,518
effective HSP length: 100
effective length of query: 158
effective length of database: 14,460,918
effective search space: 2284825044
effective search space used: 2284825044
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.