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Search of human proteins with 134152672
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|134152672 syndecan binding protein 2 isoform a [Homo
sapiens]
(292 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|134152672 syndecan binding protein 2 isoform a [Homo sapiens] 577 e-165
gi|38016916 syndecan binding protein 2 isoform b [Homo sapiens] 414 e-116
gi|55749490 syntenin isoform 1 [Homo sapiens] 343 1e-94
gi|56243522 syntenin isoform 1 [Homo sapiens] 343 1e-94
gi|55749523 syntenin isoform 3 [Homo sapiens] 343 1e-94
gi|55749515 syntenin isoform 3 [Homo sapiens] 343 1e-94
gi|55749504 syntenin isoform 2 [Homo sapiens] 333 1e-91
gi|22035548 amyloid beta A4 precursor protein-binding, family A,... 67 1e-11
gi|11342678 amyloid beta (A4) precursor protein-binding, family ... 66 4e-11
gi|194353992 amyloid beta A4 precursor protein-binding, family A... 58 9e-09
gi|22035550 amyloid beta A4 precursor protein-binding, family A,... 58 9e-09
gi|4557529 post-synaptic density protein 95 isoform 1 [Homo sapi... 45 1e-04
gi|192447426 post-synaptic density protein 95 isoform 2 [Homo sa... 45 1e-04
gi|112382257 InaD-like [Homo sapiens] 45 1e-04
gi|194018553 solute carrier family 9 isoform 3 regulator 2 isofo... 44 1e-04
gi|71897229 solute carrier family 9 isoform 3 regulator 2 isofor... 44 1e-04
gi|218156340 chapsyn-110 isoform 3 [Homo sapiens] 43 3e-04
gi|218156338 chapsyn-110 isoform 1 [Homo sapiens] 43 3e-04
gi|91199538 chapsyn-110 isoform 2 [Homo sapiens] 43 3e-04
gi|95089461 discs large homolog 5 [Homo sapiens] 43 4e-04
gi|11993943 Tax1 binding protein 3 [Homo sapiens] 43 4e-04
gi|21361142 PDZ domain containing 1 [Homo sapiens] 42 8e-04
gi|119943106 synapse-associated protein 102 isoform a [Homo sapi... 42 8e-04
gi|119120897 par-3 partitioning defective 3 homolog B isoform b ... 42 8e-04
gi|45827729 scribble isoform b [Homo sapiens] 41 0.001
gi|45827731 scribble isoform a [Homo sapiens] 41 0.001
gi|119943108 synapse-associated protein 102 isoform b [Homo sapi... 40 0.002
gi|148539628 discs, large homolog 1 isoform 1 [Homo sapiens] 40 0.002
gi|148539578 discs, large homolog 1 isoform 2 [Homo sapiens] 40 0.002
gi|5453992 protein tyrosine phosphatase, non-receptor type 13 is... 39 0.004
>gi|134152672 syndecan binding protein 2 isoform a [Homo sapiens]
Length = 292
Score = 577 bits (1487), Expect = e-165
Identities = 292/292 (100%), Positives = 292/292 (100%)
Query: 1 MSSLYPSLEDLKVDQAIQAQVRASPKMPALPVQATAISPPPVLYPNLAELENYMGLSLSS 60
MSSLYPSLEDLKVDQAIQAQVRASPKMPALPVQATAISPPPVLYPNLAELENYMGLSLSS
Sbjct: 1 MSSLYPSLEDLKVDQAIQAQVRASPKMPALPVQATAISPPPVLYPNLAELENYMGLSLSS 60
Query: 61 QEVQESLLQIPEGDSTAVSGPGPGQMVAPVTGYSLGVRRAEIKPGVREIHLCKDERGKTG 120
QEVQESLLQIPEGDSTAVSGPGPGQMVAPVTGYSLGVRRAEIKPGVREIHLCKDERGKTG
Sbjct: 61 QEVQESLLQIPEGDSTAVSGPGPGQMVAPVTGYSLGVRRAEIKPGVREIHLCKDERGKTG 120
Query: 121 LRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKI 180
LRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKI
Sbjct: 121 LRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKI 180
Query: 181 VVVVRDRPFQRTVTMHKDSMGHVGFVIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNV 240
VVVVRDRPFQRTVTMHKDSMGHVGFVIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNV
Sbjct: 181 VVVVRDRPFQRTVTMHKDSMGHVGFVIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNV 240
Query: 241 IGLKDKKIMEILATAGNVVTLTIIPSVIYEHMVKKLPPVLLHHTMDHSIPDA 292
IGLKDKKIMEILATAGNVVTLTIIPSVIYEHMVKKLPPVLLHHTMDHSIPDA
Sbjct: 241 IGLKDKKIMEILATAGNVVTLTIIPSVIYEHMVKKLPPVLLHHTMDHSIPDA 292
>gi|38016916 syndecan binding protein 2 isoform b [Homo sapiens]
Length = 207
Score = 414 bits (1063), Expect = e-116
Identities = 207/207 (100%), Positives = 207/207 (100%)
Query: 86 MVAPVTGYSLGVRRAEIKPGVREIHLCKDERGKTGLRLRKVDQGLFVQLVQANTPASLVG 145
MVAPVTGYSLGVRRAEIKPGVREIHLCKDERGKTGLRLRKVDQGLFVQLVQANTPASLVG
Sbjct: 1 MVAPVTGYSLGVRRAEIKPGVREIHLCKDERGKTGLRLRKVDQGLFVQLVQANTPASLVG 60
Query: 146 LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRDRPFQRTVTMHKDSMGHVGF 205
LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRDRPFQRTVTMHKDSMGHVGF
Sbjct: 61 LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRDRPFQRTVTMHKDSMGHVGF 120
Query: 206 VIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTIIP 265
VIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTIIP
Sbjct: 121 VIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTIIP 180
Query: 266 SVIYEHMVKKLPPVLLHHTMDHSIPDA 292
SVIYEHMVKKLPPVLLHHTMDHSIPDA
Sbjct: 181 SVIYEHMVKKLPPVLLHHTMDHSIPDA 207
>gi|55749490 syntenin isoform 1 [Homo sapiens]
Length = 298
Score = 343 bits (880), Expect = 1e-94
Identities = 174/296 (58%), Positives = 228/296 (77%), Gaps = 7/296 (2%)
Query: 3 SLYPSLEDLKVDQAIQAQVR--ASPKMPALPVQATAISPPPV-LYPNL-AELENYMGLSL 58
SLYPSLEDLKVD+ IQAQ A+P PA+ +A+A P LYP L EL YMGLSL
Sbjct: 2 SLYPSLEDLKVDKVIQAQTAFSANPANPAILSEASAPIPHDGNLYPRLYPELSQYMGLSL 61
Query: 59 SSQEVQESLLQIPEG--DSTAVSGPGP-GQMVAPVTGYSLGVRRAEIKPGVREIHLCKDE 115
+ +E++ ++ + V+ P MVAPVTG +G+RRAEIK G+RE+ LCKD+
Sbjct: 62 NEEEIRANVAVVSGAPLQGQLVARPSSINYMVAPVTGNDVGIRRAEIKQGIREVILCKDQ 121
Query: 116 RGKTGLRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKA 175
GK GLRL+ +D G+FVQLVQAN+PASLVGLRFGDQ+LQI+G +CAGWSS KAH+V+K+A
Sbjct: 122 DGKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQA 181
Query: 176 SGDKIVVVVRDRPFQRTVTMHKDSMGHVGFVIKKGKIVSLVKGSSAARNGLLTNHYVCEV 235
G+KI + +RDRPF+RT+TMHKDS GHVGF+ K GKI S+VK SSAARNGLLT H +CE+
Sbjct: 182 FGEKITMTIRDRPFERTITMHKDSTGHVGFIFKNGKITSIVKDSSAARNGLLTEHNICEI 241
Query: 236 DGQNVIGLKDKKIMEILATAGNVVTLTIIPSVIYEHMVKKLPPVLLHHTMDHSIPD 291
+GQNVIGLKD +I +IL+T+G VVT+TI+P+ I+EH++K++ P ++ MDH+IP+
Sbjct: 242 NGQNVIGLKDSQIADILSTSGTVVTITIMPAFIFEHIIKRMAPSIMKSLMDHTIPE 297
>gi|56243522 syntenin isoform 1 [Homo sapiens]
Length = 298
Score = 343 bits (880), Expect = 1e-94
Identities = 174/296 (58%), Positives = 228/296 (77%), Gaps = 7/296 (2%)
Query: 3 SLYPSLEDLKVDQAIQAQVR--ASPKMPALPVQATAISPPPV-LYPNL-AELENYMGLSL 58
SLYPSLEDLKVD+ IQAQ A+P PA+ +A+A P LYP L EL YMGLSL
Sbjct: 2 SLYPSLEDLKVDKVIQAQTAFSANPANPAILSEASAPIPHDGNLYPRLYPELSQYMGLSL 61
Query: 59 SSQEVQESLLQIPEG--DSTAVSGPGP-GQMVAPVTGYSLGVRRAEIKPGVREIHLCKDE 115
+ +E++ ++ + V+ P MVAPVTG +G+RRAEIK G+RE+ LCKD+
Sbjct: 62 NEEEIRANVAVVSGAPLQGQLVARPSSINYMVAPVTGNDVGIRRAEIKQGIREVILCKDQ 121
Query: 116 RGKTGLRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKA 175
GK GLRL+ +D G+FVQLVQAN+PASLVGLRFGDQ+LQI+G +CAGWSS KAH+V+K+A
Sbjct: 122 DGKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQA 181
Query: 176 SGDKIVVVVRDRPFQRTVTMHKDSMGHVGFVIKKGKIVSLVKGSSAARNGLLTNHYVCEV 235
G+KI + +RDRPF+RT+TMHKDS GHVGF+ K GKI S+VK SSAARNGLLT H +CE+
Sbjct: 182 FGEKITMTIRDRPFERTITMHKDSTGHVGFIFKNGKITSIVKDSSAARNGLLTEHNICEI 241
Query: 236 DGQNVIGLKDKKIMEILATAGNVVTLTIIPSVIYEHMVKKLPPVLLHHTMDHSIPD 291
+GQNVIGLKD +I +IL+T+G VVT+TI+P+ I+EH++K++ P ++ MDH+IP+
Sbjct: 242 NGQNVIGLKDSQIADILSTSGTVVTITIMPAFIFEHIIKRMAPSIMKSLMDHTIPE 297
>gi|55749523 syntenin isoform 3 [Homo sapiens]
Length = 297
Score = 343 bits (879), Expect = 1e-94
Identities = 174/295 (58%), Positives = 228/295 (77%), Gaps = 6/295 (2%)
Query: 3 SLYPSLEDLKVDQAIQAQVR--ASPKMPALPVQATAISPPPV-LYPNL-AELENYMGLSL 58
SLYPSLEDLKVD+ IQAQ A+P PA+ +A+A P LYP L EL YMGLSL
Sbjct: 2 SLYPSLEDLKVDKVIQAQTAFSANPANPAILSEASAPIPHDGNLYPRLYPELSQYMGLSL 61
Query: 59 SSQEVQESLLQIPEGDSTA-VSGPGP-GQMVAPVTGYSLGVRRAEIKPGVREIHLCKDER 116
+ +E++ ++ + V+ P MVAPVTG +G+RRAEIK G+RE+ LCKD+
Sbjct: 62 NEEEIRANVAVVSGAPLQGLVARPSSINYMVAPVTGNDVGIRRAEIKQGIREVILCKDQD 121
Query: 117 GKTGLRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKAS 176
GK GLRL+ +D G+FVQLVQAN+PASLVGLRFGDQ+LQI+G +CAGWSS KAH+V+K+A
Sbjct: 122 GKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAF 181
Query: 177 GDKIVVVVRDRPFQRTVTMHKDSMGHVGFVIKKGKIVSLVKGSSAARNGLLTNHYVCEVD 236
G+KI + +RDRPF+RT+TMHKDS GHVGF+ K GKI S+VK SSAARNGLLT H +CE++
Sbjct: 182 GEKITMTIRDRPFERTITMHKDSTGHVGFIFKNGKITSIVKDSSAARNGLLTEHNICEIN 241
Query: 237 GQNVIGLKDKKIMEILATAGNVVTLTIIPSVIYEHMVKKLPPVLLHHTMDHSIPD 291
GQNVIGLKD +I +IL+T+G VVT+TI+P+ I+EH++K++ P ++ MDH+IP+
Sbjct: 242 GQNVIGLKDSQIADILSTSGTVVTITIMPAFIFEHIIKRMAPSIMKSLMDHTIPE 296
>gi|55749515 syntenin isoform 3 [Homo sapiens]
Length = 297
Score = 343 bits (879), Expect = 1e-94
Identities = 174/295 (58%), Positives = 228/295 (77%), Gaps = 6/295 (2%)
Query: 3 SLYPSLEDLKVDQAIQAQVR--ASPKMPALPVQATAISPPPV-LYPNL-AELENYMGLSL 58
SLYPSLEDLKVD+ IQAQ A+P PA+ +A+A P LYP L EL YMGLSL
Sbjct: 2 SLYPSLEDLKVDKVIQAQTAFSANPANPAILSEASAPIPHDGNLYPRLYPELSQYMGLSL 61
Query: 59 SSQEVQESLLQIPEGDSTA-VSGPGP-GQMVAPVTGYSLGVRRAEIKPGVREIHLCKDER 116
+ +E++ ++ + V+ P MVAPVTG +G+RRAEIK G+RE+ LCKD+
Sbjct: 62 NEEEIRANVAVVSGAPLQGLVARPSSINYMVAPVTGNDVGIRRAEIKQGIREVILCKDQD 121
Query: 117 GKTGLRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKAS 176
GK GLRL+ +D G+FVQLVQAN+PASLVGLRFGDQ+LQI+G +CAGWSS KAH+V+K+A
Sbjct: 122 GKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAF 181
Query: 177 GDKIVVVVRDRPFQRTVTMHKDSMGHVGFVIKKGKIVSLVKGSSAARNGLLTNHYVCEVD 236
G+KI + +RDRPF+RT+TMHKDS GHVGF+ K GKI S+VK SSAARNGLLT H +CE++
Sbjct: 182 GEKITMTIRDRPFERTITMHKDSTGHVGFIFKNGKITSIVKDSSAARNGLLTEHNICEIN 241
Query: 237 GQNVIGLKDKKIMEILATAGNVVTLTIIPSVIYEHMVKKLPPVLLHHTMDHSIPD 291
GQNVIGLKD +I +IL+T+G VVT+TI+P+ I+EH++K++ P ++ MDH+IP+
Sbjct: 242 GQNVIGLKDSQIADILSTSGTVVTITIMPAFIFEHIIKRMAPSIMKSLMDHTIPE 296
>gi|55749504 syntenin isoform 2 [Homo sapiens]
Length = 292
Score = 333 bits (853), Expect = 1e-91
Identities = 169/294 (57%), Positives = 222/294 (75%), Gaps = 9/294 (3%)
Query: 3 SLYPSLEDLKVDQAIQAQVRASPKMPALPVQATAISPPPV-LYPNL-AELENYMGLSLSS 60
SLYPSLEDLK A A +P PA+ +A+A P LYP L EL YMGLSL+
Sbjct: 2 SLYPSLEDLKAQTAFSA----NPANPAILSEASAPIPHDGNLYPRLYPELSQYMGLSLNE 57
Query: 61 QEVQESLLQIPEG--DSTAVSGPGP-GQMVAPVTGYSLGVRRAEIKPGVREIHLCKDERG 117
+E++ ++ + V+ P MVAPVTG +G+RRAEIK G+RE+ LCKD+ G
Sbjct: 58 EEIRANVAVVSGAPLQGQLVARPSSINYMVAPVTGNDVGIRRAEIKQGIREVILCKDQDG 117
Query: 118 KTGLRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKASG 177
K GLRL+ +D G+FVQLVQAN+PASLVGLRFGDQ+LQI+G +CAGWSS KAH+V+K+A G
Sbjct: 118 KIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFG 177
Query: 178 DKIVVVVRDRPFQRTVTMHKDSMGHVGFVIKKGKIVSLVKGSSAARNGLLTNHYVCEVDG 237
+KI + +RDRPF+RT+TMHKDS GHVGF+ K GKI S+VK SSAARNGLLT H +CE++G
Sbjct: 178 EKITMTIRDRPFERTITMHKDSTGHVGFIFKNGKITSIVKDSSAARNGLLTEHNICEING 237
Query: 238 QNVIGLKDKKIMEILATAGNVVTLTIIPSVIYEHMVKKLPPVLLHHTMDHSIPD 291
QNVIGLKD +I +IL+T+G VVT+TI+P+ I+EH++K++ P ++ MDH+IP+
Sbjct: 238 QNVIGLKDSQIADILSTSGTVVTITIMPAFIFEHIIKRMAPSIMKSLMDHTIPE 291
>gi|22035548 amyloid beta A4 precursor protein-binding, family A,
member 1 [Homo sapiens]
Length = 837
Score = 67.4 bits (163), Expect = 1e-11
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 140 PASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVV--VVRDRPFQRTVTMH 196
PA G L GDQ++ I+G G ++K V +VR P +
Sbjct: 693 PAEKSGKLNIGDQIMSINGTSLVGLPLSTCQSIIKGLKNQSRVKLNIVRCPPVTTVLIRR 752
Query: 197 KDSMGHVGFVIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAG 256
D +GF ++ G I SL++G A R G+ H + E++GQ+V+ +KI+ IL+ A
Sbjct: 753 PDLRYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNAV 812
Query: 257 NVVTLTIIPSVIYEHMVKKLPPVLL 281
+ + +P+ +Y + + PV +
Sbjct: 813 GEIHMKTMPAAMYRLLTAQEQPVYI 837
>gi|11342678 amyloid beta (A4) precursor protein-binding, family A,
member 3 [Homo sapiens]
Length = 575
Score = 65.9 bits (159), Expect = 4e-11
Identities = 52/185 (28%), Positives = 83/185 (44%), Gaps = 12/185 (6%)
Query: 107 REIHLCKDERGKTGLRLRKVDQG---LFVQLVQANT----PASLVG-LRFGDQLLQIDGR 158
RE+HL ++R GL + V+ G L V AN PA G L GD+L I+G
Sbjct: 393 REVHL--EKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGT 450
Query: 159 DCAGWSSHKAHQVVKKASGDKIVV--VVRDRPFQRTVTMHKDSMGHVGFVIKKGKIVSLV 216
G V++ V +V P + + +GF ++ G I SL+
Sbjct: 451 SLVGLPLAACQAAVRETKSQTSVTLSIVHCPPVTTAIIHRPHAREQLGFCVEDGIICSLL 510
Query: 217 KGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTIIPSVIYEHMVKKL 276
+G A R G+ H + E++GQ+V+ +I+E+L A V + +P+ Y + +
Sbjct: 511 RGGIAERGGIRVGHRIIEINGQSVVATPHARIIELLTEAYGEVHIKTMPAATYRLLTGQE 570
Query: 277 PPVLL 281
PV L
Sbjct: 571 QPVYL 575
>gi|194353992 amyloid beta A4 precursor protein-binding, family A,
member 2 isoform b [Homo sapiens]
Length = 737
Score = 58.2 bits (139), Expect = 9e-09
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 140 PASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVV--VVRDRPFQRTVTMH 196
PA+ G L GDQ++ I+G G ++K V +V P +
Sbjct: 593 PAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCPPVTTVLIKR 652
Query: 197 KDSMGHVGFVIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAG 256
D +GF ++ G I SL++G A R G+ H + E++GQ+V+ +KI++ L+ +
Sbjct: 653 PDLKYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSV 712
Query: 257 NVVTLTIIPSVIYEHMVKKLPPVLL 281
+ + +P+ ++ + + P+ +
Sbjct: 713 GEIHMKTMPAAMFRLLTGQETPLYI 737
>gi|22035550 amyloid beta A4 precursor protein-binding, family A,
member 2 isoform a [Homo sapiens]
Length = 749
Score = 58.2 bits (139), Expect = 9e-09
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 140 PASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVV--VVRDRPFQRTVTMH 196
PA+ G L GDQ++ I+G G ++K V +V P +
Sbjct: 605 PAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCPPVTTVLIKR 664
Query: 197 KDSMGHVGFVIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAG 256
D +GF ++ G I SL++G A R G+ H + E++GQ+V+ +KI++ L+ +
Sbjct: 665 PDLKYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSV 724
Query: 257 NVVTLTIIPSVIYEHMVKKLPPVLL 281
+ + +P+ ++ + + P+ +
Sbjct: 725 GEIHMKTMPAAMFRLLTGQETPLYI 749
>gi|4557529 post-synaptic density protein 95 isoform 1 [Homo
sapiens]
Length = 767
Score = 44.7 bits (104), Expect = 1e-04
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 76 TAVSGPGPGQMVAPVTGYSLGVRRAEIKPGVREIHLCKDERGKTGLRLRKVD----QGLF 131
TA++ P + +PV LG +P IH RG TGL V +G+F
Sbjct: 327 TAMTPTSP-RRYSPVAKDLLGEEDIPREPRRIVIH-----RGSTGLGFNIVGGEDGEGIF 380
Query: 132 VQLVQANTPASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRDRP 188
+ + A PA L G LR GDQ+L ++G D +SH+ + K +G + ++ + +P
Sbjct: 381 ISFILAGGPADLSGELRKGDQILSVNGVDLRN-ASHEQAAIALKNAGQTVTIIAQYKP 437
>gi|192447426 post-synaptic density protein 95 isoform 2 [Homo
sapiens]
Length = 721
Score = 44.7 bits (104), Expect = 1e-04
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 76 TAVSGPGPGQMVAPVTGYSLGVRRAEIKPGVREIHLCKDERGKTGLRLRKVD----QGLF 131
TA++ P + +PV LG +P IH RG TGL V +G+F
Sbjct: 281 TAMTPTSP-RRYSPVAKDLLGEEDIPREPRRIVIH-----RGSTGLGFNIVGGEDGEGIF 334
Query: 132 VQLVQANTPASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRDRP 188
+ + A PA L G LR GDQ+L ++G D +SH+ + K +G + ++ + +P
Sbjct: 335 ISFILAGGPADLSGELRKGDQILSVNGVDLRN-ASHEQAAIALKNAGQTVTIIAQYKP 391
>gi|112382257 InaD-like [Homo sapiens]
Length = 1801
Score = 44.7 bits (104), Expect = 1e-04
Identities = 50/206 (24%), Positives = 83/206 (40%), Gaps = 48/206 (23%)
Query: 106 VREIHLCKDERGKTGLRLRKVDQGLFVQLVQANTPASLVG-LRFGDQLLQIDGRDCAGWS 164
V E+ L D G + G+ V+ + A G L+ GD +L+I G + G +
Sbjct: 246 VEEVELINDGSGLGFGIVGGKTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMT 305
Query: 165 SHKAHQVVKKASGDKIVVVVRDRPFQRTVT------------------------------ 194
S + QV++ ++V RD +VT
Sbjct: 306 SEQVAQVLRNCGNSVRMLVARDPAGDISVTPPAPAALPVALPTVASKGPGSDSSLFETYN 365
Query: 195 ---MHKDS-------MGHVGFVIKKGK-----IVSLVKGSSAARNG-LLTNHYVCEVDGQ 238
+ KD +G+VG G+ + S++ GS+A NG + N + VDG
Sbjct: 366 VELVRKDGQSLGIRIVGYVG-TSHTGEASGIYVKSIIPGSAAYHNGHIQVNDKIVAVDGV 424
Query: 239 NVIGLKDKKIMEILATAGNVVTLTII 264
N+ G + ++E+L AG VV LT++
Sbjct: 425 NIQGFANHDVVEVLRNAGQVVHLTLV 450
Score = 38.1 bits (87), Expect = 0.009
Identities = 68/289 (23%), Positives = 115/289 (39%), Gaps = 59/289 (20%)
Query: 32 VQATAISPPPVLYPNLAELENYMGLS-LSSQE---VQESLLQIPEGDS------------ 75
V A++P PV + + +E+ G +SS+E V+ + Q+PE +S
Sbjct: 1325 VNQMAVTPFPVPSSSPSSIEDQSGTEPISSEEDGSVEVGIKQLPESESFKLAVSQMKQQK 1384
Query: 76 --TAVSGPGPGQMVAPVTGY-----------------SLGVRRAEIKPGVREIHLCKDER 116
T VS +AP + Y S+ I PG I + +
Sbjct: 1385 YPTKVSFSSQEIPLAPASSYHSTDADFTGYGGFQAPLSVDPATCPIVPGQEMI--IEISK 1442
Query: 117 GKTGLRLRKVD------QGLFVQLVQANTPASLVG-LRFGDQLLQIDGRDCAGWSSHKAH 169
G++GL L V + + V A+ G L GDQ+L+++G D S +A
Sbjct: 1443 GRSGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAI 1502
Query: 170 QVVKKASGDKIVVVVRDRPFQR--------TVTMHKDSMGHVGFVI---KKGK---IVSL 215
+++ +VV RD R V + K + +G I + G I +
Sbjct: 1503 TALRQTPQKVRLVVYRDEAHYRDEENLEIFPVDLQKKAGRGLGLSIVGKRNGSGVFISDI 1562
Query: 216 VKGSSAARNG-LLTNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTI 263
VKG +A +G L+ + V+G+++ + + IL A +V L I
Sbjct: 1563 VKGGAADLDGRLIQGDQILSVNGEDMRNASQETVATILKCAQGLVQLEI 1611
Score = 37.0 bits (84), Expect = 0.021
Identities = 49/195 (25%), Positives = 86/195 (44%), Gaps = 38/195 (19%)
Query: 107 REIHLCKDERGKTG------LRLRKVDQG---LFVQLVQANTPASL-VGLRFGDQLLQID 156
R+I ER TG + LR + G +FV+ VQ + A L+ DQ+L I+
Sbjct: 130 RQIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAIN 189
Query: 157 GRDCAGWSSHK-AHQVVKKASGDKIVVVVRDRPFQRTVTMHKDS---------MGHV--- 203
SH+ A ++++ +G ++V R+ ++ T + GHV
Sbjct: 190 HTPLDQNISHQQAIALLQQTTGSLRLIVAREPVHTKSSTSSSLNDTTLPETVCWGHVEEV 249
Query: 204 ---------GFVIKKGK-----IVSLVKGSSAARNGLL-TNHYVCEVDGQNVIGLKDKKI 248
GF I GK + ++V G A R+G L T ++ ++ G NV G+ +++
Sbjct: 250 ELINDGSGLGFGIVGGKTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQV 309
Query: 249 MEILATAGNVVTLTI 263
++L GN V + +
Sbjct: 310 AQVLRNCGNSVRMLV 324
Score = 36.6 bits (83), Expect = 0.027
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 108 EIHLCKDERGKTGLRLR------KVDQGLFVQLVQANTPASLVG-LRFGDQLLQIDGRDC 160
E+H+ + E+ K GL L + +FV + PA+ G +R GD+LL+I+ +
Sbjct: 1236 ELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQIL 1295
Query: 161 AGWSSHKAHQVVKKASGDKIVVVVRD 186
G S A ++K A +V +R+
Sbjct: 1296 YGRSHQNASAIIKTAPSKVKLVFIRN 1321
Score = 30.0 bits (66), Expect = 2.5
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 127 DQGLFVQLVQANTPASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVR 185
D +F+ ++QA+ A+ L+ GD+++ I+G+ G S ++K A G I+ VV
Sbjct: 1701 DIPVFIAMIQASGVAARTQKLKVGDRIVSINGQPLDGLSHADVVNLLKNAYGRIILQVVA 1760
Query: 186 D 186
D
Sbjct: 1761 D 1761
>gi|194018553 solute carrier family 9 isoform 3 regulator 2 isoform
a [Homo sapiens]
Length = 337
Score = 44.3 bits (103), Expect = 1e-04
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 111 LCKDERGKTG----LRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSH 166
LC+ RG+ G L K +G F++ V+ +PA LR GD+L++++G + G + H
Sbjct: 11 LCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVNGVNVEGETHH 70
Query: 167 KAHQVVKKASGDKIVVVV 184
+ Q +K G ++VV
Sbjct: 71 QVVQRIKAVEGQTRLLVV 88
Score = 36.2 bits (82), Expect = 0.035
Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 15/120 (12%)
Query: 159 DCAGWSSHKAHQVVKKASGDKIVVVVRD-RPFQRTVTMHKDSMGHVGFVIKKGK------ 211
D A SH + K SG +R+ RP R + K G+ GF + K
Sbjct: 124 DWAHTGSHSSEAGKKDVSGP-----LRELRP--RLCHLRKGPQGY-GFNLHSDKSRPGQY 175
Query: 212 IVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTIIPSVIYEH 271
I S+ GS AAR+GL + EV+GQNV GL+ +++ + + L ++ EH
Sbjct: 176 IRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETDEH 235
Score = 32.7 bits (73), Expect = 0.39
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 101 EIKPGVREIHLCKDERGKT-GLRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRD 159
E++P R HL K +G L K G +++ V +PA+ GLR D+L++++G++
Sbjct: 146 ELRP--RLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQN 203
Query: 160 CAGWSSHKAHQVVKKASGDKIVVVV---RDRPFQR 191
G + +K + ++VV D F+R
Sbjct: 204 VEGLRHAEVVASIKAREDEARLLVVDPETDEHFKR 238
>gi|71897229 solute carrier family 9 isoform 3 regulator 2 isoform b
[Homo sapiens]
Length = 326
Score = 44.3 bits (103), Expect = 1e-04
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 111 LCKDERGKTG----LRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSH 166
LC+ RG+ G L K +G F++ V+ +PA LR GD+L++++G + G + H
Sbjct: 11 LCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVNGVNVEGETHH 70
Query: 167 KAHQVVKKASGDKIVVVV 184
+ Q +K G ++VV
Sbjct: 71 QVVQRIKAVEGQTRLLVV 88
Score = 36.2 bits (82), Expect = 0.035
Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 15/120 (12%)
Query: 159 DCAGWSSHKAHQVVKKASGDKIVVVVRD-RPFQRTVTMHKDSMGHVGFVIKKGK------ 211
D A SH + K SG +R+ RP R + K G+ GF + K
Sbjct: 124 DWAHTGSHSSEAGKKDVSGP-----LRELRP--RLCHLRKGPQGY-GFNLHSDKSRPGQY 175
Query: 212 IVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTIIPSVIYEH 271
I S+ GS AAR+GL + EV+GQNV GL+ +++ + + L ++ EH
Sbjct: 176 IRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETDEH 235
Score = 32.7 bits (73), Expect = 0.39
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 101 EIKPGVREIHLCKDERGKT-GLRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRD 159
E++P R HL K +G L K G +++ V +PA+ GLR D+L++++G++
Sbjct: 146 ELRP--RLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQN 203
Query: 160 CAGWSSHKAHQVVKKASGDKIVVVV---RDRPFQR 191
G + +K + ++VV D F+R
Sbjct: 204 VEGLRHAEVVASIKAREDEARLLVVDPETDEHFKR 238
>gi|218156340 chapsyn-110 isoform 3 [Homo sapiens]
Length = 749
Score = 43.1 bits (100), Expect = 3e-04
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 116 RGKTGLRLRKVD----QGLFVQLVQANTPASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQ 170
+G TGL V +G+FV + A PA L G L+ GDQ+L ++G D G +SH+
Sbjct: 323 KGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELQRGDQILSVNGIDLRG-ASHEQAA 381
Query: 171 VVKKASGDKIVVVVRDRP 188
K +G + ++ + +P
Sbjct: 382 AALKGAGQTVTIIAQYQP 399
>gi|218156338 chapsyn-110 isoform 1 [Homo sapiens]
Length = 975
Score = 43.1 bits (100), Expect = 3e-04
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 116 RGKTGLRLRKVD----QGLFVQLVQANTPASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQ 170
+G TGL V +G+FV + A PA L G L+ GDQ+L ++G D G +SH+
Sbjct: 531 KGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELQRGDQILSVNGIDLRG-ASHEQAA 589
Query: 171 VVKKASGDKIVVVVRDRP 188
K +G + ++ + +P
Sbjct: 590 AALKGAGQTVTIIAQYQP 607
>gi|91199538 chapsyn-110 isoform 2 [Homo sapiens]
Length = 870
Score = 43.1 bits (100), Expect = 3e-04
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 116 RGKTGLRLRKVD----QGLFVQLVQANTPASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQ 170
+G TGL V +G+FV + A PA L G L+ GDQ+L ++G D G +SH+
Sbjct: 426 KGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELQRGDQILSVNGIDLRG-ASHEQAA 484
Query: 171 VVKKASGDKIVVVVRDRP 188
K +G + ++ + +P
Sbjct: 485 AALKGAGQTVTIIAQYQP 502
>gi|95089461 discs large homolog 5 [Homo sapiens]
Length = 1919
Score = 42.7 bits (99), Expect = 4e-04
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 94 SLGVRRAEIKPGVREIHLCKDERGKTGLRLRKVDQ---GLFVQLVQANTPASLVGLRFGD 150
SLG RR + +P V E K ++G L + V G++V V + A GL +GD
Sbjct: 1334 SLGERRKD-RPYVEEPRHVKVQKGSEPLGISIVSGEKGGIYVSKVTVGSIAHQAGLEYGD 1392
Query: 151 QLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRDRPFQRTVTMHKDSMGHV 203
QLL+ +G + + +A ++ + D I ++ + P ++ H S H+
Sbjct: 1393 QLLEFNGINLRSATEQQARLIIGQQC-DTITILAQYNPHVHQLSSHSRSSSHL 1444
>gi|11993943 Tax1 binding protein 3 [Homo sapiens]
Length = 124
Score = 42.7 bits (99), Expect = 4e-04
Identities = 20/69 (28%), Positives = 40/69 (57%)
Query: 125 KVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVV 184
K D+G++V V PA + GL+ GD+++Q++G D + +A + + K S + + ++V
Sbjct: 50 KTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLV 109
Query: 185 RDRPFQRTV 193
+ Q+ V
Sbjct: 110 TRQSLQKAV 118
>gi|21361142 PDZ domain containing 1 [Homo sapiens]
Length = 519
Score = 41.6 bits (96), Expect = 8e-04
Identities = 44/205 (21%), Positives = 84/205 (40%), Gaps = 47/205 (22%)
Query: 107 REIHLCKDERGKTG--LRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWS 164
RE L K E G LR+ K +G V++V+ +PA GL+ GD++L+I+G
Sbjct: 8 RECKLSKQEGQNYGFFLRIEKDTEGHLVRVVEKCSPAEKAGLQDGDRVLRINGVFVDKEE 67
Query: 165 SHKAHQVVKKASGDKIVVVVRDRPFQRTVTMHKD-------------------------- 198
+ +V+K+ ++V+ +++ V D
Sbjct: 68 HMQVVDLVRKSGNSVTLLVLDGDSYEKAVKTRVDLKELGQSQKEQGLSDNILSPVMNGGV 127
Query: 199 -------------SMGHVGFVIK--KGK----IVSLVKGSSAARNGLLTNHYVCEVDGQN 239
G GF +K +GK + + A R G+L + ++ EV+G+N
Sbjct: 128 QTWTQPRLCYLVKEGGSYGFSLKTVQGKKGVYMTDITPQGVAMRAGVLADDHLIEVNGEN 187
Query: 240 VIGLKDKKIMEILATAGNVVTLTII 264
V ++++E + +G+ V ++
Sbjct: 188 VEDASHEEVVEKVKKSGSRVMFLLV 212
Score = 33.9 bits (76), Expect = 0.17
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 212 IVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTIIPSVIYEH 271
I + KG A GL + EV+G NV+ +K+++ + ++G VTL + Y++
Sbjct: 403 IKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNVTLLVCGKKAYDY 462
Query: 272 -MVKKLPPV 279
KK+P V
Sbjct: 463 FQAKKIPIV 471
Score = 32.7 bits (73), Expect = 0.39
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 195 MHKDSMGHVGFVIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILAT 254
+ KD+ GH+ V++K S A + GL V ++G V + ++++++
Sbjct: 26 IEKDTEGHLVRVVEKC--------SPAEKAGLQDGDRVLRINGVFVDKEEHMQVVDLVRK 77
Query: 255 AGNVVTLTIIPSVIYEHMVK 274
+GN VTL ++ YE VK
Sbjct: 78 SGNSVTLLVLDGDSYEKAVK 97
>gi|119943106 synapse-associated protein 102 isoform a [Homo
sapiens]
Length = 817
Score = 41.6 bits (96), Expect = 8e-04
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 9/117 (7%)
Query: 78 VSGPGPGQMVAPVTGYSLGVRRAEIKPG-VREIHLCKDERGKTGLRLRKVD----QGLFV 132
VS P P Q+ P T YS R + RE +G TGL V +G+FV
Sbjct: 354 VSYPAPPQV--PPTRYSPIPRHMLAEEDFTREPRKIILHKGSTGLGFNIVGGEDGEGIFV 411
Query: 133 QLVQANTPASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRDRP 188
+ A PA L G LR GD++L ++G + + +A +K+A G + +V + RP
Sbjct: 412 SFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRA-GQSVTIVAQYRP 467
>gi|119120897 par-3 partitioning defective 3 homolog B isoform b
[Homo sapiens]
Length = 1143
Score = 41.6 bits (96), Expect = 8e-04
Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 28/182 (15%)
Query: 12 KVDQAIQAQVRASPKMPALPVQATAISPPPVLYPNLAELENYMGLSLSSQEVQESLLQIP 71
+ D + Q SP++P L + ++ P+L+ L + G + ++++++ L + P
Sbjct: 340 ETDASASLQQNKSPRVPRLGGKPSS--------PSLSPLMGF-GSNKNAKKIKIDLKKGP 390
Query: 72 EG-------DSTAVSGPGPGQMVAPVTGYSLGVRRAEIKPGVREIHLC-KDERGKTG--- 120
EG +++ GPGP V + ++ ++ G R + + +D G+T
Sbjct: 391 EGLGFTVVTRDSSIHGPGP-IFVKNILPKGAAIKDGRLQSGDRILEVNGRDVTGRTQEEL 449
Query: 121 -LRLRKVDQGLFVQLVQANT-----PASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQVVK 173
LR QG LV A P L G LR DQL+ ++G G S+H+A + ++
Sbjct: 450 VAMLRSTKQGETASLVIARQEGHFLPRELDGRLRMNDQLIAVNGESLLGKSNHEAMETLR 509
Query: 174 KA 175
++
Sbjct: 510 RS 511
>gi|45827729 scribble isoform b [Homo sapiens]
Length = 1630
Score = 40.8 bits (94), Expect = 0.001
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 117 GKTGLRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKAS 176
GK + D+G+F+ V PA+ G+R GD+LL+++G G H+A + ++ A
Sbjct: 745 GKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGAG 804
Query: 177 GDKIVVVVRDR 187
+ V R+R
Sbjct: 805 TAVQMRVWRER 815
Score = 40.4 bits (93), Expect = 0.002
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 25/144 (17%)
Query: 56 LSLSSQEVQESLLQIPEGDSTAVSGPGPGQMVAPVTGYSLGVRRAEIKPGVREIHLCKDE 115
L+++ Q+V+++ Q AVS ++ P SL VRR PG+RE+ + K
Sbjct: 1059 LAVNGQDVRDATHQ------EAVSA-----LLRPCLELSLLVRRDPAPPGLRELCIQKAP 1107
Query: 116 RGKTGLRLR------------KVDQGLFVQLVQANTPASLVG-LRFGDQLLQIDGRDCAG 162
+ G+ +R D+G+F+ V A G LR G +LL+++ + G
Sbjct: 1108 GERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLG 1167
Query: 163 WSSHKAHQVVKKASGDKIVVVVRD 186
+ +A Q+++ GD + V+V D
Sbjct: 1168 LTHGEAVQLLRSV-GDTLTVLVCD 1190
Score = 39.7 bits (91), Expect = 0.003
Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 19/156 (12%)
Query: 127 DQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRD 186
+ G+F+ V A+ GLR GD++L ++G+D + +A + + + ++V RD
Sbjct: 1033 EPGVFISKVLPRGLAARSGLRVGDRILAVNGQDVRDATHQEAVSALLRPCLELSLLVRRD 1092
Query: 187 -------------RPFQRT-VTMHKDSMGHVG---FVIKKGKIVSLVKGSSAA-RNG-LL 227
P +R +++ + GH G +G +S V + AA R+G L
Sbjct: 1093 PAPPGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLR 1152
Query: 228 TNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTI 263
+ EV+ Q+++GL + +++L + G+ +T+ +
Sbjct: 1153 VGLRLLEVNQQSLLGLTHGEAVQLLRSVGDTLTVLV 1188
>gi|45827731 scribble isoform a [Homo sapiens]
Length = 1655
Score = 40.8 bits (94), Expect = 0.001
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 117 GKTGLRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKAS 176
GK + D+G+F+ V PA+ G+R GD+LL+++G G H+A + ++ A
Sbjct: 745 GKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGAG 804
Query: 177 GDKIVVVVRDR 187
+ V R+R
Sbjct: 805 TAVQMRVWRER 815
Score = 40.4 bits (93), Expect = 0.002
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 25/144 (17%)
Query: 56 LSLSSQEVQESLLQIPEGDSTAVSGPGPGQMVAPVTGYSLGVRRAEIKPGVREIHLCKDE 115
L+++ Q+V+++ Q AVS ++ P SL VRR PG+RE+ + K
Sbjct: 1059 LAVNGQDVRDATHQ------EAVSA-----LLRPCLELSLLVRRDPAPPGLRELCIQKAP 1107
Query: 116 RGKTGLRLR------------KVDQGLFVQLVQANTPASLVG-LRFGDQLLQIDGRDCAG 162
+ G+ +R D+G+F+ V A G LR G +LL+++ + G
Sbjct: 1108 GERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLG 1167
Query: 163 WSSHKAHQVVKKASGDKIVVVVRD 186
+ +A Q+++ GD + V+V D
Sbjct: 1168 LTHGEAVQLLRSV-GDTLTVLVCD 1190
Score = 39.7 bits (91), Expect = 0.003
Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 19/156 (12%)
Query: 127 DQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRD 186
+ G+F+ V A+ GLR GD++L ++G+D + +A + + + ++V RD
Sbjct: 1033 EPGVFISKVLPRGLAARSGLRVGDRILAVNGQDVRDATHQEAVSALLRPCLELSLLVRRD 1092
Query: 187 -------------RPFQRT-VTMHKDSMGHVG---FVIKKGKIVSLVKGSSAA-RNG-LL 227
P +R +++ + GH G +G +S V + AA R+G L
Sbjct: 1093 PAPPGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLR 1152
Query: 228 TNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTI 263
+ EV+ Q+++GL + +++L + G+ +T+ +
Sbjct: 1153 VGLRLLEVNQQSLLGLTHGEAVQLLRSVGDTLTVLV 1188
>gi|119943108 synapse-associated protein 102 isoform b [Homo
sapiens]
Length = 512
Score = 40.4 bits (93), Expect = 0.002
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 102 IKPG--VREIHLCKDERGKTGLRLRKVD----QGLFVQLVQANTPASLVG-LRFGDQLLQ 154
++PG RE +G TGL V +G+FV + A PA L G LR GD++L
Sbjct: 38 LRPGGDAREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILS 97
Query: 155 IDGRDCAGWSSHKAHQVVKKASGDKIVVVVRDRP 188
++G + + +A +K+A G + +V + RP
Sbjct: 98 VNGVNLRNATHEQAAAALKRA-GQSVTIVAQYRP 130
>gi|148539628 discs, large homolog 1 isoform 1 [Homo sapiens]
Length = 904
Score = 40.0 bits (92), Expect = 0.002
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 81 PGPGQMVAPVTGYSLGVRRAEIKPGVREIHLCKDERGKTGLRLRKVD----QGLFVQLVQ 136
P +PV+ LG +P +H RG TGL V +G+F+ +
Sbjct: 441 PASPARYSPVSKAVLGDDEITREPRKVVLH-----RGSTGLGFNIVGGEDGEGIFISFIL 495
Query: 137 ANTPASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRDRP 188
A PA L G LR GD+++ ++ D +SH+ K +G + +V + RP
Sbjct: 496 AGGPADLSGELRKGDRIISVNSVDLRA-ASHEQAAAALKNAGQAVTIVAQYRP 547
>gi|148539578 discs, large homolog 1 isoform 2 [Homo sapiens]
Length = 926
Score = 40.0 bits (92), Expect = 0.002
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 81 PGPGQMVAPVTGYSLGVRRAEIKPGVREIHLCKDERGKTGLRLRKVD----QGLFVQLVQ 136
P +PV+ LG +P +H RG TGL V +G+F+ +
Sbjct: 441 PASPARYSPVSKAVLGDDEITREPRKVVLH-----RGSTGLGFNIVGGEDGEGIFISFIL 495
Query: 137 ANTPASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRDRP 188
A PA L G LR GD+++ ++ D +SH+ K +G + +V + RP
Sbjct: 496 AGGPADLSGELRKGDRIISVNSVDLRA-ASHEQAAAALKNAGQAVTIVAQYRP 547
>gi|5453992 protein tyrosine phosphatase, non-receptor type 13 isoform
2 [Homo sapiens]
Length = 2466
Score = 39.3 bits (90), Expect = 0.004
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 15/122 (12%)
Query: 72 EGDSTAVSGPGPGQMVAPVTGYSLGVRRAEIKPGVREI---HLCKDERGKTGL------R 122
E DS+++ PG ++ L R + + REI +L KD + G +
Sbjct: 1040 ESDSSSIEDPGQAYVLDV-----LHKRWSIVSSPEREITLVNLKKDAKYGLGFQIIGGEK 1094
Query: 123 LRKVDQGLFVQLVQANTPASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIV 181
+ ++D G+F+ V PA L G L+ GD+L+ ++ G S H A ++++ A D +
Sbjct: 1095 MGRLDLGIFISSVAPGGPADLDGCLKPGDRLISVNSVSLEGVSHHAAIEILQNAPEDVTL 1154
Query: 182 VV 183
V+
Sbjct: 1155 VI 1156
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,289,068
Number of Sequences: 37866
Number of extensions: 489375
Number of successful extensions: 2025
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 1821
Number of HSP's gapped (non-prelim): 257
length of query: 292
length of database: 18,247,518
effective HSP length: 101
effective length of query: 191
effective length of database: 14,423,052
effective search space: 2754802932
effective search space used: 2754802932
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.