SDCBP 32852

Name: SDCBP	Sequence: fasta or formatted (292aa)		NCBI GI: 55749504
Description: syntenin isoform 2		Referenced in: PDZ Domain
Other entries for this name: alt prot [298aa] syntenin isoform 1 alt prot [297aa] syntenin isoform 3 alt prot [297aa] syntenin isoform 3 alt prot [298aa] syntenin isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 23 2 C cysteine 1.0 3 1 D aspartate 4.8 14 1 E glutamate 5.1 15 3 F phenylalanine 3.1 9 1 G glycine 7.5 22 1 H histidine 2.4 7 1 I isoleucine 10.3 30 2 K lysine 5.5 16 1 L leucine 8.2 24 2 M methionine 3.1 9 1 N asparagine 5.5 16 1 P proline 5.1 15 1 Q glutamine 4.5 13 1 R arginine 4.5 13 2 S serine 8.2 24 2 T threonine 4.8 14 1 V valine 6.5 19 2 W tryptophan 0.3 1 1 Y tyrosine 1.7 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 syntenin isoform 2 SDCBP 0.989 syntenin isoform 1 SDCBP 0.989 syntenin isoform 1 SDCBP 0.976 syntenin isoform 3 SDCBP 0.976 syntenin isoform 3 SDCBP2 0.561 syndecan binding protein 2 isoform a SDCBP2 0.497 syndecan binding protein 2 isoform b APBA1 0.067 amyloid beta A4 precursor protein-binding, family A,... APBA2 0.066 amyloid beta A4 precursor protein-binding, family A... APBA2 0.066 amyloid beta A4 precursor protein-binding, family A,... APBA3 0.058 amyloid beta (A4) precursor protein-binding, family ... DLG1 0.044 discs, large homolog 1 isoform 1 DLG1 0.044 discs, large homolog 1 isoform 2 DLG3 0.040 synapse-associated protein 102 isoform b DLG3 0.040 synapse-associated protein 102 isoform a SCRIB 0.036 scribble isoform b SCRIB 0.036 scribble isoform a DLG2 0.035 chapsyn-110 isoform 3 DLG2 0.035 chapsyn-110 isoform 1 DLG2 0.035 chapsyn-110 isoform 2 TAX1BP3 0.035 Tax1 binding protein 3 ARHGEF12 0.033 Rho guanine nucleotide exchange factor (GEF) 12 [Homo... DLG4 0.033 post-synaptic density protein 95 isoform 1 DLG4 0.033 post-synaptic density protein 95 isoform 2 PDZK1 0.033 PDZ domain containing 1 LOC100133567 0.031 PREDICTED: similar to Rap guanine nucleotide exchan... IL16 0.031 interleukin 16 isoform 2 SNTG1 0.031 syntrophin, gamma 1 RAPGEF2 0.031 Rap guanine nucleotide exchange factor 2 DLG5 0.031 discs large homolog 5 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.