PDZK1 12908

Name: PDZK1	Sequence: fasta or formatted (519aa)		NCBI GI: 21361142
Description: PDZ domain containing 1		Referenced in: Mammary Tissues PDZ Domain
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.8 25 1 C cysteine 1.0 5 1 D aspartate 6.9 36 2 E glutamate 8.9 46 2 F phenylalanine 2.5 13 2 G glycine 8.5 44 2 H histidine 2.7 14 1 I isoleucine 3.7 19 2 K lysine 8.5 44 2 L leucine 8.5 44 2 M methionine 2.1 11 1 N asparagine 4.0 21 2 P proline 4.4 23 2 Q glutamine 4.2 22 1 R arginine 3.9 20 1 S serine 8.1 42 3 T threonine 4.4 23 2 V valine 10.0 52 2 W tryptophan 0.2 1 1 Y tyrosine 2.7 14 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PDZ domain containing 1 LOC100133863 0.324 PREDICTED: similar to PDZ domain containing 1 [Homo... PDZD3 0.189 PDZ domain containing 3 SLC9A3R1 0.136 sodium/hydrogen exchanger regulatory factor 1 SLC9A3R2 0.115 solute carrier family 9 isoform 3 regulator 2 isofo... SLC9A3R2 0.115 solute carrier family 9 isoform 3 regulator 2 isofor... DLG4 0.072 post-synaptic density protein 95 isoform 1 DLG4 0.072 post-synaptic density protein 95 isoform 2 DLG1 0.069 discs, large homolog 1 isoform 1 DLG1 0.069 discs, large homolog 1 isoform 2 DLG3 0.064 synapse-associated protein 102 isoform a DLG2 0.062 chapsyn-110 isoform 3 MAGI3 0.062 membrane-associated guanylate kinase-related 3 iso... MAGI3 0.062 membrane-associated guanylate kinase-related 3 iso... MPDZ 0.059 multiple PDZ domain protein DLG2 0.056 chapsyn-110 isoform 1 DLG2 0.056 chapsyn-110 isoform 2 MAGI1 0.054 membrane associated guanylate kinase, WW and PDZ dom... MAGI1 0.054 membrane associated guanylate kinase, WW and PDZ dom... MAGI1 0.053 membrane associated guanylate kinase, WW and PDZ dom... SCRIB 0.052 scribble isoform b SCRIB 0.052 scribble isoform a INADL 0.042 InaD-like FRMPD2 0.040 FERM and PDZ domain containing 2 isoform 1 FRMPD2 0.040 FERM and PDZ domain containing 2 isoform 3 PARD3 0.040 partitioning-defective protein 3 homolog PARD3B 0.039 par-3 partitioning defective 3 homolog B isoform a ... PARD3B 0.039 par-3 partitioning defective 3 homolog B isoform c ... MAST4 0.037 microtubule associated serine/threonine kinase fami... PDZD7 0.037 PDZ domain containing 7 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.