SDCBP 32853

Name: SDCBP	Sequence: fasta or formatted (297aa)		NCBI GI: 55749515
Description: syntenin isoform 3		Referenced in: PDZ Domain
Other entries for this name: alt prot [298aa] syntenin isoform 1 alt prot [292aa] syntenin isoform 2 alt mRNA [297aa] syntenin isoform 3 alt prot [298aa] syntenin isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 23 2 C cysteine 1.0 3 1 D aspartate 5.1 15 1 E glutamate 5.1 15 3 F phenylalanine 3.0 9 1 G glycine 7.4 22 1 H histidine 2.4 7 1 I isoleucine 10.4 31 2 K lysine 5.7 17 1 L leucine 8.1 24 2 M methionine 3.0 9 1 N asparagine 5.4 16 1 P proline 5.1 15 1 Q glutamine 4.4 13 1 R arginine 4.4 13 2 S serine 8.1 24 2 T threonine 4.7 14 1 V valine 7.1 21 2 W tryptophan 0.3 1 1 Y tyrosine 1.7 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 syntenin isoform 3 SDCBP 1.000 syntenin isoform 3 SDCBP 0.991 syntenin isoform 1 SDCBP 0.991 syntenin isoform 1 SDCBP 0.961 syntenin isoform 2 SDCBP2 0.570 syndecan binding protein 2 isoform a SDCBP2 0.489 syndecan binding protein 2 isoform b APBA1 0.066 amyloid beta A4 precursor protein-binding, family A,... APBA2 0.065 amyloid beta A4 precursor protein-binding, family A... APBA2 0.065 amyloid beta A4 precursor protein-binding, family A,... APBA3 0.057 amyloid beta (A4) precursor protein-binding, family ... DLG3 0.039 synapse-associated protein 102 isoform b DLG3 0.039 synapse-associated protein 102 isoform a SCRIB 0.036 scribble isoform b SCRIB 0.036 scribble isoform a DLG2 0.034 chapsyn-110 isoform 3 DLG2 0.034 chapsyn-110 isoform 1 DLG2 0.034 chapsyn-110 isoform 2 DLG1 0.034 discs, large homolog 1 isoform 1 DLG1 0.034 discs, large homolog 1 isoform 2 TAX1BP3 0.034 Tax1 binding protein 3 ARHGEF12 0.032 Rho guanine nucleotide exchange factor (GEF) 12 [Homo... DLG4 0.032 post-synaptic density protein 95 isoform 1 DLG4 0.032 post-synaptic density protein 95 isoform 2 PDZK1 0.032 PDZ domain containing 1 LOC100133567 0.030 PREDICTED: similar to Rap guanine nucleotide exchan... IL16 0.030 interleukin 16 isoform 2 SNTG1 0.030 syntrophin, gamma 1 RAPGEF2 0.030 Rap guanine nucleotide exchange factor 2 DLG5 0.030 discs large homolog 5 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.