APBA3 1287

Name: APBA3	Sequence: fasta or formatted (575aa)		NCBI GI: 11342678
Description: amyloid beta (A4) precursor protein-binding, family A, member 3		Referenced in: Additional Brain Proteins PDZ Domain
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.6 55 3 C cysteine 2.1 12 1 D aspartate 5.6 32 2 E glutamate 8.2 47 2 F phenylalanine 1.6 9 1 G glycine 8.9 51 2 H histidine 3.7 21 1 I isoleucine 4.7 27 2 K lysine 1.2 7 1 L leucine 10.4 60 2 M methionine 2.1 12 2 N asparagine 1.2 7 1 P proline 9.4 54 2 Q glutamine 4.5 26 2 R arginine 5.9 34 3 S serine 8.0 46 5 T threonine 5.0 29 2 V valine 5.7 33 2 W tryptophan 0.7 4 1 Y tyrosine 1.6 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 amyloid beta (A4) precursor protein-binding, family ... APBA1 0.429 amyloid beta A4 precursor protein-binding, family A,... APBA2 0.406 amyloid beta A4 precursor protein-binding, family A... APBA2 0.398 amyloid beta A4 precursor protein-binding, family A,... SDCBP2 0.036 syndecan binding protein 2 isoform a SDCBP2 0.036 syndecan binding protein 2 isoform b SDCBP 0.028 syntenin isoform 3 SDCBP 0.028 syntenin isoform 3 SDCBP 0.028 syntenin isoform 2 SDCBP 0.028 syntenin isoform 1 SDCBP 0.028 syntenin isoform 1 CASK 0.024 calcium/calmodulin-dependent serine protein kinase ... CASK 0.024 calcium/calmodulin-dependent serine protein kinase ... CASK 0.024 calcium/calmodulin-dependent serine protein kinase ... MPDZ 0.023 multiple PDZ domain protein INADL 0.023 InaD-like MAGI2 0.022 membrane associated guanylate kinase, WW and PDZ dom... MAGI3 0.022 membrane-associated guanylate kinase-related 3 iso... MAGI3 0.022 membrane-associated guanylate kinase-related 3 iso... GRIP1 0.022 glutamate receptor interacting protein 1 GULP1 0.022 GULP, engulfment adaptor PTB domain containing 1 [Hom... SHC3 0.021 src homology 2 domain-containing transforming prote... NOS1 0.021 nitric oxide synthase 1, neuronal RADIL 0.021 Rap GTPase interactor SCRIB 0.021 scribble isoform b SCRIB 0.021 scribble isoform a MAGI1 0.021 membrane associated guanylate kinase, WW and PDZ dom... MAGI1 0.021 membrane associated guanylate kinase, WW and PDZ dom... MAGI1 0.021 membrane associated guanylate kinase, WW and PDZ dom... PPP1R9B 0.020 protein phosphatase 1, regulatory subunit 9B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.