Guide to the Human Genome
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Name: SLC9A3R2 Sequence: fasta or formatted (326aa) NCBI GI: 71897229
Description:

solute carrier family 9 isoform 3 regulator 2 isoform b

Referenced in:

PDZ Domain
Solute Carrier Families

Other entries for this name:
alt prot [337aa] solute carrier family 9 isoform 3 regulator 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         27           3
 C cysteine            1.2          4           1
 D aspartate           4.9         16           1
 E glutamate           9.8         32           2
 F phenylalanine       1.8          6           1
 G glycine             8.9         29           2
 H histidine           4.0         13           2
 I isoleucine          1.8          6           1
 K lysine              4.3         14           2
 L leucine             8.3         27           2
 M methionine          1.2          4           1
 N asparagine          3.1         10           1
 P proline             7.7         25           2
 Q glutamine           4.3         14           1
 R arginine           11.0         36           3
 S serine              6.4         21           2
 T threonine           4.0         13           1
 V valine              7.1         23           2
 W tryptophan          0.9          3           1
 Y tyrosine            0.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 9 isoform 3 regulator 2 isofor... 
SLC9A3R2              0.988   solute carrier family 9 isoform 3 regulator 2 isofo...
SLC9A3R1              0.463   sodium/hydrogen exchanger regulatory factor 1 
PDZK1                 0.181   PDZ domain containing 1 
PDZD3                 0.166   PDZ domain containing 3 
LOC100133863          0.097   PREDICTED: similar to PDZ domain containing 1 [Homo...
SCRIB                 0.084   scribble isoform b 
SCRIB                 0.084   scribble isoform a 
INADL                 0.078   InaD-like 
MAGI1                 0.077   membrane associated guanylate kinase, WW and PDZ dom...
SNX27                 0.072   sorting nexin family member 27 
MPDZ                  0.070   multiple PDZ domain protein 
MAGI2                 0.070   membrane associated guanylate kinase, WW and PDZ dom...
DFNB31                0.069   CASK-interacting protein CIP98 isoform 1 
USH1C                 0.066   harmonin isoform b3 
USH1C                 0.066   harmonin isoform a 
MAGI1                 0.066   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.066   membrane associated guanylate kinase, WW and PDZ dom...
PTPN13                0.061   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.061   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.061   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.061   protein tyrosine phosphatase, non-receptor type 13 is...
LIN7C                 0.061   lin-7 homolog C 
LIN7B                 0.061   lin-7 homolog B 
DLG3                  0.059   synapse-associated protein 102 isoform a 
PARD3                 0.059   partitioning-defective protein 3 homolog 
PDZD2                 0.056   PDZ domain containing 2 
DLG1                  0.056   discs, large homolog 1 isoform 1 
DLG1                  0.056   discs, large homolog 1 isoform 2 
MAGI3                 0.056   membrane-associated guanylate kinase-related  3 iso...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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