SDCBP2 3326

Name: SDCBP2	Sequence: fasta or formatted (292aa)		NCBI GI: 134152672
Description: syndecan binding protein 2 isoform a		Referenced in: PDZ Domain
Other entries for this name: alt prot [207aa] syndecan binding protein 2 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 20 2 C cysteine 1.0 3 1 D aspartate 5.1 15 1 E glutamate 4.1 12 1 F phenylalanine 1.4 4 1 G glycine 8.2 24 1 H histidine 3.4 10 2 I isoleucine 5.5 16 2 K lysine 6.8 20 2 L leucine 10.3 30 2 M methionine 3.1 9 1 N asparagine 2.4 7 1 P proline 6.5 19 3 Q glutamine 5.5 16 1 R arginine 4.5 13 2 S serine 7.5 22 2 T threonine 4.1 12 1 V valine 11.3 33 4 W tryptophan 0.3 1 1 Y tyrosine 2.1 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 syndecan binding protein 2 isoform a SDCBP2 0.705 syndecan binding protein 2 isoform b SDCBP 0.576 syntenin isoform 1 SDCBP 0.576 syntenin isoform 1 SDCBP 0.576 syntenin isoform 3 SDCBP 0.576 syntenin isoform 3 SDCBP 0.558 syntenin isoform 2 APBA1 0.076 amyloid beta A4 precursor protein-binding, family A,... APBA3 0.074 amyloid beta (A4) precursor protein-binding, family ... APBA2 0.060 amyloid beta A4 precursor protein-binding, family A... APBA2 0.060 amyloid beta A4 precursor protein-binding, family A,... DLG4 0.036 post-synaptic density protein 95 isoform 1 DLG4 0.036 post-synaptic density protein 95 isoform 2 INADL 0.036 InaD-like SLC9A3R2 0.034 solute carrier family 9 isoform 3 regulator 2 isofo... SLC9A3R2 0.034 solute carrier family 9 isoform 3 regulator 2 isofor... DLG2 0.033 chapsyn-110 isoform 3 DLG2 0.033 chapsyn-110 isoform 1 DLG2 0.033 chapsyn-110 isoform 2 DLG5 0.033 discs large homolog 5 TAX1BP3 0.033 Tax1 binding protein 3 PDZK1 0.031 PDZ domain containing 1 DLG3 0.031 synapse-associated protein 102 isoform a PARD3B 0.031 par-3 partitioning defective 3 homolog B isoform b ... SCRIB 0.029 scribble isoform b SCRIB 0.029 scribble isoform a DLG3 0.027 synapse-associated protein 102 isoform b DLG1 0.027 discs, large homolog 1 isoform 1 DLG1 0.027 discs, large homolog 1 isoform 2 PTPN13 0.025 protein tyrosine phosphatase, non-receptor type 13 is... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.