APBA1 14001

Name: APBA1	Sequence: fasta or formatted (837aa)		NCBI GI: 22035548
Description: amyloid beta A4 precursor protein-binding, family A, member 1		Referenced in: Additional Brain Proteins PDZ Domain
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.0 75 3 C cysteine 1.0 8 1 D aspartate 6.3 53 2 E glutamate 10.9 91 4 F phenylalanine 1.6 13 1 G glycine 6.9 58 3 H histidine 3.2 27 2 I isoleucine 5.9 49 2 K lysine 3.9 33 2 L leucine 6.3 53 2 M methionine 2.9 24 2 N asparagine 3.0 25 1 P proline 6.1 51 2 Q glutamine 6.1 51 3 R arginine 6.2 52 3 S serine 8.0 67 3 T threonine 3.7 31 2 V valine 5.4 45 2 W tryptophan 0.2 2 1 Y tyrosine 3.5 29 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 amyloid beta A4 precursor protein-binding, family A,... APBA2 0.421 amyloid beta A4 precursor protein-binding, family A,... APBA2 0.412 amyloid beta A4 precursor protein-binding, family A... APBA3 0.297 amyloid beta (A4) precursor protein-binding, family ... SDCBP2 0.026 syndecan binding protein 2 isoform a SDCBP2 0.026 syndecan binding protein 2 isoform b RP1L1 0.024 retinitis pigmentosa 1-like 1 SDCBP 0.022 syntenin isoform 3 SDCBP 0.022 syntenin isoform 3 SDCBP 0.022 syntenin isoform 2 SDCBP 0.022 syntenin isoform 1 SDCBP 0.022 syntenin isoform 1 INADL 0.021 InaD-like GULP1 0.019 GULP, engulfment adaptor PTB domain containing 1 [Hom... MPDZ 0.019 multiple PDZ domain protein GRIP1 0.018 glutamate receptor interacting protein 1 DLG2 0.018 chapsyn-110 isoform 3 DLG2 0.018 chapsyn-110 isoform 1 DLG2 0.018 chapsyn-110 isoform 2 SHC4 0.016 rai-like protein GRIP2 0.016 glutamate receptor interacting protein 2 DLG3 0.016 synapse-associated protein 102 isoform a DLG4 0.016 post-synaptic density protein 95 isoform 1 DLG4 0.016 post-synaptic density protein 95 isoform 2 DLG1 0.015 discs, large homolog 1 isoform 1 DLG1 0.015 discs, large homolog 1 isoform 2 NOS1 0.015 nitric oxide synthase 1, neuronal MAGI2 0.014 membrane associated guanylate kinase, WW and PDZ dom... MAGI1 0.014 membrane associated guanylate kinase, WW and PDZ dom... MAGI1 0.014 membrane associated guanylate kinase, WW and PDZ dom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.