APBA2 14002

Name: APBA2	Sequence: fasta or formatted (749aa)		NCBI GI: 22035550
Description: amyloid beta A4 precursor protein-binding, family A, member 2 isoform a		Referenced in: Additional Brain Proteins PDZ Domain
Other entries for this name: alt prot [737aa] amyloid beta A4 precursor protein-binding, family A, member 2 iso...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 51 2 C cysteine 2.0 15 1 D aspartate 5.7 43 2 E glutamate 10.5 79 4 F phenylalanine 1.5 11 1 G glycine 7.6 57 2 H histidine 3.1 23 1 I isoleucine 6.3 47 2 K lysine 4.7 35 3 L leucine 7.1 53 2 M methionine 2.9 22 2 N asparagine 4.3 32 3 P proline 7.2 54 2 Q glutamine 5.3 40 2 R arginine 4.4 33 3 S serine 7.9 59 3 T threonine 4.0 30 2 V valine 5.3 40 4 W tryptophan 0.4 3 1 Y tyrosine 2.9 22 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 amyloid beta A4 precursor protein-binding, family A,... APBA2 0.979 amyloid beta A4 precursor protein-binding, family A... APBA1 0.464 amyloid beta A4 precursor protein-binding, family A,... APBA3 0.303 amyloid beta (A4) precursor protein-binding, family ... SDCBP 0.024 syntenin isoform 3 SDCBP 0.024 syntenin isoform 3 SDCBP 0.024 syntenin isoform 2 SDCBP 0.024 syntenin isoform 1 SDCBP 0.024 syntenin isoform 1 SDCBP2 0.022 syndecan binding protein 2 isoform a SDCBP2 0.022 syndecan binding protein 2 isoform b INADL 0.020 InaD-like MPDZ 0.020 multiple PDZ domain protein DLG4 0.019 post-synaptic density protein 95 isoform 1 DLG4 0.019 post-synaptic density protein 95 isoform 2 GRIP1 0.018 glutamate receptor interacting protein 1 DLG3 0.018 synapse-associated protein 102 isoform a SHC4 0.017 rai-like protein DLG1 0.017 discs, large homolog 1 isoform 1 DLG1 0.017 discs, large homolog 1 isoform 2 RP1L1 0.017 retinitis pigmentosa 1-like 1 DLG2 0.017 chapsyn-110 isoform 3 DLG2 0.017 chapsyn-110 isoform 1 DLG2 0.017 chapsyn-110 isoform 2 MPP5 0.015 membrane protein, palmitoylated 5 LOC100132713 0.015 PREDICTED: similar to hCG1654128 NOS1 0.014 nitric oxide synthase 1, neuronal LOC100132713 0.014 PREDICTED: similar to hCG1654128 GRIP2 0.014 glutamate receptor interacting protein 2 SCRIB 0.014 scribble isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.