Guide to the Human Genome
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Name: TAX1BP3 Sequence: fasta or formatted (124aa) NCBI GI: 11993943
Description:

Tax1 binding protein 3

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0          5           1
 C cysteine            0.0          0           0
 D aspartate           5.6          7           1
 E glutamate           5.6          7           2
 F phenylalanine       1.6          2           1
 G glycine             9.7         12           3
 H histidine           1.6          2           1
 I isoleucine          7.3          9           1
 K lysine              5.6          7           1
 L leucine             7.3          9           2
 M methionine          4.0          5           1
 N asparagine          2.4          3           1
 P proline             4.0          5           1
 Q glutamine           9.7         12           2
 R arginine            6.5          8           1
 S serine              7.3          9           1
 T threonine           5.6          7           1
 V valine              9.7         12           2
 W tryptophan          0.8          1           1
 Y tyrosine            1.6          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Tax1 binding protein 3 
SCRIB                 0.164   scribble isoform b 
SCRIB                 0.164   scribble isoform a 
ERBB2IP               0.155   ERBB2 interacting protein isoform 7 
ERBB2IP               0.150   ERBB2 interacting protein isoform 2 
LRRC7                 0.145   leucine rich repeat containing 7 
DLG2                  0.141   chapsyn-110 isoform 3 
DLG2                  0.141   chapsyn-110 isoform 1 
DLG2                  0.141   chapsyn-110 isoform 2 
DLG3                  0.132   synapse-associated protein 102 isoform a 
SYNJ2BP               0.127   synaptojanin 2 binding protein 
DLG1                  0.127   discs, large homolog 1 isoform 1 
DLG1                  0.127   discs, large homolog 1 isoform 2 
PDZRN3                0.123   PDZ domain containing ring finger 3 
DLG4                  0.118   post-synaptic density protein 95 isoform 1 
DLG4                  0.118   post-synaptic density protein 95 isoform 2 
PDZD7                 0.114   PDZ domain containing 7 
SLC9A3R2              0.114   solute carrier family 9 isoform 3 regulator 2 isofo...
SLC9A3R2              0.114   solute carrier family 9 isoform 3 regulator 2 isofor...
DLG3                  0.109   synapse-associated protein 102 isoform b 
DFNB31                0.105   CASK-interacting protein CIP98 isoform 1 
SLC9A3R1              0.100   sodium/hydrogen exchanger regulatory factor 1 
USH1C                 0.095   harmonin isoform b3 
USH1C                 0.095   harmonin isoform a 
IL16                  0.091   interleukin 16 isoform 2 
MAGI1                 0.086   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.086   membrane associated guanylate kinase, WW and PDZ dom...
FRMPD2                0.086   FERM and PDZ domain containing 2 isoform 1 
FRMPD2                0.086   FERM and PDZ domain containing 2 isoform 3 
SDCBP                 0.086   syntenin isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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