Guide to the Human Genome
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Name: KRTAP4-5 Sequence: fasta or formatted (181aa) NCBI GI: 118572608
Description:

keratin associated protein 4-5

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.6          1           1
 C cysteine           36.5         66           3
 D aspartate           0.0          0           0
 E glutamate           2.2          4           1
 F phenylalanine       0.0          0           0
 G glycine             1.7          3           1
 H histidine           1.7          3           1
 I isoleucine          1.7          3           1
 K lysine              0.6          1           1
 L leucine             1.1          2           1
 M methionine          0.6          1           1
 N asparagine          0.6          1           1
 P proline             9.4         17           1
 Q glutamine           5.0          9           1
 R arginine            7.7         14           1
 S serine             15.5         28           2
 T threonine           8.8         16           2
 V valine              5.0          9           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.7          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 4-5 
KRTAP4-12             0.855   keratin associated protein 4-12 
KRTAP4-8              0.818   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.818   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-11             0.808   keratin associated protein 4-11 
KRTAP4-8              0.806   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.806   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.804   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.792   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.792   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.790   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-9              0.790   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-9              0.790   keratin associated protein 4-9 
KRTAP4-8              0.776   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.776   keratin associated protein 4.8 
KRTAP4-3              0.642   keratin associated protein 4-3 
KRTAP4-4              0.633   keratin associated protein 4.4 
KRTAP4-7              0.607   keratin associated protein 4-7 
KRTAP4-7              0.607   PREDICTED: keratin associated protein 4-7 
KRTAP4-2              0.483   keratin associated protein 4-2 
LOC728318             0.446   PREDICTED: hypothetical protein 
LOC728318             0.446   PREDICTED: hypothetical protein 
LOC728318             0.443   PREDICTED: hypothetical protein 
KRTAP9-2              0.404   keratin associated protein 9.2 
KRTAP9-4              0.395   keratin associated protein 9-4 
LOC728341             0.390   PREDICTED: keratin-associated protein 9-2-like 1-li...
KRTAP4-1              0.390   keratin associated protein 4-1 
KRTAP9-9              0.379   keratin associated protein 9-9 
LOC100131696          0.376   PREDICTED: keratin associated protein 
LOC100131696          0.376   PREDICTED: keratin associated protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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