| Name: LOC100133863 | Sequence: fasta or formatted (227aa) | NCBI GI: 169217736 | |
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Description: PREDICTED: similar to PDZ domain containing 1
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 5.3 12 1 C cysteine 2.6 6 1 D aspartate 7.0 16 1 E glutamate 7.0 16 3 F phenylalanine 3.5 8 1 G glycine 6.2 14 2 H histidine 2.6 6 1 I isoleucine 7.0 16 2 K lysine 7.5 17 2 L leucine 8.4 19 2 M methionine 0.9 2 1 N asparagine 4.8 11 2 P proline 7.5 17 2 Q glutamine 3.5 8 1 R arginine 3.5 8 1 S serine 8.8 20 2 T threonine 3.5 8 2 V valine 6.2 14 2 W tryptophan 0.4 1 1 Y tyrosine 3.5 8 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: similar to PDZ domain containing 1 [Homo... PDZK1 0.738 PDZ domain containing 1 SLC9A3R2 0.140 solute carrier family 9 isoform 3 regulator 2 isofo... SLC9A3R2 0.140 solute carrier family 9 isoform 3 regulator 2 isofor... SLC9A3R1 0.129 sodium/hydrogen exchanger regulatory factor 1 PDZD3 0.079 PDZ domain containing 3 DLG4 0.079 post-synaptic density protein 95 isoform 1 DLG4 0.079 post-synaptic density protein 95 isoform 2 DLG3 0.072 synapse-associated protein 102 isoform a SNX27 0.072 sorting nexin family member 27 DLG2 0.070 chapsyn-110 isoform 1 DLG2 0.070 chapsyn-110 isoform 2 DLG3 0.063 synapse-associated protein 102 isoform b DLG1 0.063 discs, large homolog 1 isoform 1 DLG1 0.063 discs, large homolog 1 isoform 2 GRID2IP 0.059 glutamate receptor, ionotropic, delta 2 (Grid2) int... DLG2 0.059 chapsyn-110 isoform 3 ARHGAP21 0.054 Rho GTPase activating protein 21 MAST1 0.050 microtubule associated serine/threonine kinase 1 [Ho... RADIL 0.050 Rap GTPase interactor TJP1 0.050 tight junction protein 1 isoform b TJP1 0.050 tight junction protein 1 isoform a ARHGAP23 0.043 Rho GTPase activating protein 23 RGS12 0.043 regulator of G-protein signalling 12 isoform 2 RGS12 0.043 regulator of G-protein signalling 12 isoform 1 [Homo... CYTIP 0.043 cytohesin 1 interacting protein LIN7B 0.043 lin-7 homolog B PTPN13 0.038 protein tyrosine phosphatase, non-receptor type 13 i... PTPN13 0.038 protein tyrosine phosphatase, non-receptor type 13 i... PTPN13 0.038 protein tyrosine phosphatase, non-receptor type 13 i...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
