SNX27 25685

Name: SNX27	Sequence: fasta or formatted (528aa)		NCBI GI: 31742501
Description: sorting nexin family member 27		Referenced in: PDZ Domain ER, Golgi, and the Secretory Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 32 2 C cysteine 2.1 11 1 D aspartate 4.7 25 2 E glutamate 9.1 48 3 F phenylalanine 4.7 25 2 G glycine 8.9 47 8 H histidine 3.2 17 1 I isoleucine 4.5 24 2 K lysine 5.7 30 2 L leucine 7.2 38 2 M methionine 1.9 10 1 N asparagine 4.4 23 1 P proline 3.8 20 2 Q glutamine 4.2 22 2 R arginine 6.1 32 3 S serine 5.3 28 1 T threonine 4.4 23 2 V valine 8.1 43 2 W tryptophan 1.1 6 1 Y tyrosine 4.5 24 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sorting nexin family member 27 SNX17 0.094 sorting nexin 17 SNX31 0.088 sorting nexin 31 SLC9A3R2 0.043 solute carrier family 9 isoform 3 regulator 2 isofo... SLC9A3R2 0.043 solute carrier family 9 isoform 3 regulator 2 isofor... LIN7C 0.041 lin-7 homolog C LIN7B 0.041 lin-7 homolog B LIN7A 0.040 lin-7 homolog A SHANK2 0.039 SH3 and multiple ankyrin repeat domains 2 isoform 2 ... SHANK2 0.039 SH3 and multiple ankyrin repeat domains 2 isoform 1... SLC9A3R1 0.035 sodium/hydrogen exchanger regulatory factor 1 SHANK3 0.034 SH3 and multiple ankyrin repeat domains 3 SHANK1 0.033 SH3 and multiple ankyrin repeat domains 1 PTPN13 0.031 protein tyrosine phosphatase, non-receptor type 13 i... DFNB31 0.030 CASK-interacting protein CIP98 isoform 1 PDZK1 0.030 PDZ domain containing 1 LOC100133863 0.030 PREDICTED: similar to PDZ domain containing 1 [Homo... PTPN13 0.029 protein tyrosine phosphatase, non-receptor type 13 i... PTPN13 0.029 protein tyrosine phosphatase, non-receptor type 13 i... PTPN13 0.029 protein tyrosine phosphatase, non-receptor type 13 is... ARHGEF11 0.028 Rho guanine nucleotide exchange factor (GEF) 11 isof... ARHGEF11 0.028 Rho guanine nucleotide exchange factor (GEF) 11 isofo... GRID2IP 0.028 glutamate receptor, ionotropic, delta 2 (Grid2) int... DLG3 0.027 synapse-associated protein 102 isoform b MAGI1 0.027 membrane associated guanylate kinase, WW and PDZ dom... MAGI1 0.027 membrane associated guanylate kinase, WW and PDZ dom... MAGI1 0.027 membrane associated guanylate kinase, WW and PDZ dom... RGS12 0.025 regulator of G-protein signalling 12 isoform 2 RGS12 0.025 regulator of G-protein signalling 12 isoform 1 [Homo... DLG3 0.025 synapse-associated protein 102 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.