POM121 24225

Name: POM121	Sequence: fasta or formatted (984aa)		NCBI GI: 26051278
Description: nuclear pore membrane protein 121		Referenced in: Nucleus and Nucleolus
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.8 126 3 C cysteine 0.4 4 1 D aspartate 1.7 17 2 E glutamate 2.8 28 3 F phenylalanine 5.8 57 2 G glycine 7.9 78 2 H histidine 0.9 9 2 I isoleucine 2.2 22 2 K lysine 4.2 41 2 L leucine 5.9 58 2 M methionine 0.8 8 1 N asparagine 2.2 22 1 P proline 13.2 130 4 Q glutamine 4.1 40 1 R arginine 2.8 28 3 S serine 17.1 168 4 T threonine 11.3 111 4 V valine 3.0 30 2 W tryptophan 0.2 2 1 Y tyrosine 0.5 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nuclear pore membrane protein 121 POM121C 0.971 POM121 membrane glycoprotein (rat)-like LOC100288540 0.819 PREDICTED: hypothetical protein XP_002342775 LOC100292653 0.348 PREDICTED: similar to hCG1998564 POM121L2 0.308 POM121 membrane glycoprotein-like 2 C15orf2 0.082 hypothetical protein LOC23742 LOC729915 0.071 PREDICTED: similar to Putative POM121-like protein ... LOC100133280 0.071 PREDICTED: similar to Putative POM121-like protein ... LOC100294020 0.066 PREDICTED: similar to POM121-like 1, partial POMZP3 0.064 POMZP3 fusion protein isoform 2 POMZP3 0.064 POMZP3 fusion protein isoform 1 NUP214 0.060 nucleoporin 214kDa MUC2 0.057 mucin 2 precursor NACA 0.051 nascent polypeptide-associated complex alpha subuni... MUC6 0.051 mucin 6, gastric MUC5B 0.048 mucin 5, subtype B, tracheobronchial MUC17 0.047 mucin 17 FLJ22184 0.047 PREDICTED: hypothetical protein FLJ22184 TRO 0.043 trophinin isoform 5 LOC100133756 0.042 PREDICTED: hypothetical protein, partial MUC4 0.042 mucin 4 isoform a MUC5AC 0.042 mucin 5AC LOC100294420 0.042 PREDICTED: similar to mucin 2 PRG4 0.042 proteoglycan 4 isoform B PRG4 0.042 proteoglycan 4 isoform A FLJ22184 0.042 PREDICTED: hypothetical protein FLJ22184 MUC12 0.040 PREDICTED: mucin 12 SRCAP 0.040 Snf2-related CBP activator protein FLJ22184 0.040 PREDICTED: hypothetical protein LOC80164 MUC12 0.040 PREDICTED: mucin 12, cell surface associated Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.