TCF4 29550

Name: TCF4	Sequence: fasta or formatted (667aa)		NCBI GI: 4507399
Description: transcription factor 4 isoform b		Referenced in: Helix-Loop-Helix Transcription Factors
Other entries for this name: alt prot [671aa] transcription factor 4 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 38 2 C cysteine 0.6 4 1 D aspartate 6.0 40 3 E glutamate 4.2 28 3 F phenylalanine 1.5 10 2 G glycine 9.7 65 2 H histidine 4.5 30 2 I isoleucine 2.2 15 2 K lysine 3.7 25 2 L leucine 7.6 51 2 M methionine 3.3 22 1 N asparagine 5.4 36 2 P proline 8.7 58 3 Q glutamine 4.3 29 2 R arginine 5.4 36 3 S serine 16.0 107 4 T threonine 4.3 29 1 V valine 3.4 23 1 W tryptophan 0.4 3 1 Y tyrosine 2.7 18 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transcription factor 4 isoform b TCF4 0.996 transcription factor 4 isoform a TCF12 0.581 transcription factor 12 isoform b TCF12 0.581 transcription factor 12 isoform b TCF12 0.571 transcription factor 12 isoform a TCF12 0.571 transcription factor 12 isoform a TCF12 0.434 transcription factor 12 isoform c TCF3 0.413 transcription factor 3 isoform E12 TCF3 0.400 transcription factor 3 isoform E47 DSPP 0.025 dentin sialophosphoprotein preproprotein HRNR 0.022 hornerin FLG 0.018 filaggrin FLG2 0.017 filaggrin family member 2 MED1 0.016 mediator complex subunit 1 MUC4 0.016 mucin 4 isoform a ATOH8 0.015 atonal homolog 8 NEUROD1 0.015 neurogenic differentiation 1 BHLHA9 0.015 PREDICTED: basic helix-loop-helix family, member a9... BHLHA9 0.015 PREDICTED: basic helix-loop-helix family, member a9... BHLHA9 0.015 PREDICTED: basic helix-loop-helix family, member a9... RNF40 0.014 ring finger protein 40 LRRFIP2 0.014 leucine rich repeat (in FLII) interacting protein 2 i... CCAR1 0.013 cell-cycle and apoptosis regulatory protein 1 EWSR1 0.013 Ewing sarcoma breakpoint region 1 isoform 1 LOC100130716 0.013 PREDICTED: similar to mucin 11 LOC100130716 0.013 PREDICTED: similar to Mucin-12 C13orf23 0.013 hypothetical protein LOC80209 isoform 2 C13orf23 0.013 hypothetical protein LOC80209 isoform 1 SORBS2 0.013 sorbin and SH3 domain containing 2 isoform 7 EWSR1 0.013 Ewing sarcoma breakpoint region 1 isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.