MUC16 36435

Name: MUC16	Sequence: fasta or formatted (14507aa)		NCBI GI: 83367077
Description: mucin 16		Referenced in: Protein Composition and Structure Proteins Measured in Common Diagnostic Tests Domain Structure of Proteins Gene Structure Mucins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.4 789 2 C cysteine 0.2 36 1 D aspartate 3.1 456 2 E glutamate 5.6 807 3 F phenylalanine 2.2 316 2 G glycine 5.2 752 2 H histidine 2.1 310 2 I isoleucine 3.9 571 2 K lysine 2.5 359 2 L leucine 7.6 1100 2 M methionine 2.5 358 2 N asparagine 2.4 354 2 P proline 8.6 1250 3 Q glutamine 2.2 320 3 R arginine 3.2 459 3 S serine 18.2 2647 5 T threonine 17.7 2571 5 V valine 5.4 783 2 W tryptophan 0.7 98 1 Y tyrosine 1.2 171 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 mucin 16 LOC100293231 0.045 PREDICTED: hypothetical protein, partial MUC12 0.026 PREDICTED: mucin 12 MUC17 0.026 mucin 17 MUC2 0.021 mucin 2 precursor MUC4 0.020 mucin 4 isoform a MUC5B 0.016 mucin 5, subtype B, tracheobronchial MUC5AC 0.014 mucin 5AC MUC12 0.010 PREDICTED: mucin 12, cell surface associated MUC12 0.009 PREDICTED: mucin 12 LOC729792 0.009 PREDICTED: hypothetical protein LOC100294136 0.009 PREDICTED: hypothetical protein LOC100294091 0.009 PREDICTED: hypothetical protein LOC100294501 0.009 PREDICTED: hypothetical protein LOC100294238 0.009 PREDICTED: hypothetical protein LOC100294204 0.009 PREDICTED: hypothetical protein LOC729792 0.009 PREDICTED: hypothetical protein LOC729792 0.009 PREDICTED: hypothetical protein LOC730401 0.009 PREDICTED: hypothetical protein LOC100294249 0.009 PREDICTED: hypothetical protein XP_002344067 MUC6 0.008 mucin 6, gastric MUC3A 0.007 PREDICTED: mucin 3A, intestinal LOC100131514 0.007 PREDICTED: similar to hCG1747327, partial GPR112 0.007 G-protein coupled receptor 112 LOC100134138 0.006 PREDICTED: similar to mucin, partial MUC3A 0.005 PREDICTED: mucin 3A, cell surface associated, parti... LOC100133714 0.005 PREDICTED: similar to Mucin-12, partial LOC100294420 0.005 PREDICTED: similar to mucin 2 LOC100294236 0.005 PREDICTED: similar to diffuse panbronchiolitis crit... NACA 0.004 nascent polypeptide-associated complex alpha subuni... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.