POM121C 5051

Name: POM121C	Sequence: fasta or formatted (987aa)		NCBI GI: 150378545
Description: POM121 membrane glycoprotein (rat)-like		Referenced in: Nucleus and Nucleolus
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.6 124 3 C cysteine 0.4 4 1 D aspartate 1.7 17 2 E glutamate 2.7 27 3 F phenylalanine 5.8 57 2 G glycine 8.1 80 2 H histidine 0.8 8 2 I isoleucine 2.1 21 2 K lysine 4.4 43 4 L leucine 5.7 56 2 M methionine 0.7 7 1 N asparagine 2.1 21 1 P proline 13.2 130 4 Q glutamine 4.3 42 1 R arginine 2.7 27 3 S serine 17.2 170 4 T threonine 12.0 118 4 V valine 2.9 29 1 W tryptophan 0.2 2 1 Y tyrosine 0.4 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 POM121 membrane glycoprotein (rat)-like POM121 0.968 nuclear pore membrane protein 121 LOC100288540 0.821 PREDICTED: hypothetical protein XP_002342775 LOC100292653 0.341 PREDICTED: similar to hCG1998564 POM121L2 0.314 POM121 membrane glycoprotein-like 2 C15orf2 0.087 hypothetical protein LOC23742 LOC100133280 0.071 PREDICTED: similar to Putative POM121-like protein ... LOC729915 0.071 PREDICTED: similar to Putative POM121-like protein ... LOC100294020 0.065 PREDICTED: similar to POM121-like 1, partial POMZP3 0.065 POMZP3 fusion protein isoform 2 POMZP3 0.065 POMZP3 fusion protein isoform 1 NUP214 0.063 nucleoporin 214kDa MUC2 0.061 mucin 2 precursor NACA 0.052 nascent polypeptide-associated complex alpha subuni... MUC4 0.051 mucin 4 isoform a MUC5B 0.050 mucin 5, subtype B, tracheobronchial MUC17 0.050 mucin 17 MUC6 0.049 mucin 6, gastric LOC100294420 0.049 PREDICTED: similar to mucin 2 PRG4 0.048 proteoglycan 4 isoform B PRG4 0.048 proteoglycan 4 isoform A FLJ22184 0.047 PREDICTED: hypothetical protein FLJ22184 MUC5AC 0.044 mucin 5AC LOC100133756 0.044 PREDICTED: hypothetical protein, partial PRG4 0.043 proteoglycan 4 isoform D PRG4 0.043 proteoglycan 4 isoform C SRCAP 0.043 Snf2-related CBP activator protein MUC12 0.043 PREDICTED: mucin 12 TRO 0.043 trophinin isoform 5 SRRM2 0.040 splicing coactivator subunit SRm300 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.