Guide to the Human Genome
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Name: ADAMTS7 Sequence: fasta or formatted (1686aa) NCBI GI: 38683827
Description:

ADAM metallopeptidase with thrombospondin type 1 motif, 7 preproprotein

Referenced in:

Metalloproteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0        118           2
 C cysteine            5.0         84           2
 D aspartate           4.9         83           2
 E glutamate           6.6        112           3
 F phenylalanine       2.4         40           1
 G glycine             9.1        153           3
 H histidine           3.3         55           2
 I isoleucine          2.1         36           2
 K lysine              2.1         36           1
 L leucine             8.2        138           5
 M methionine          0.9         15           1
 N asparagine          2.7         46           1
 P proline            11.2        189           4
 Q glutamine           4.1         69           2
 R arginine            7.1        120           3
 S serine              7.6        128           3
 T threonine           5.2         88           2
 V valine              5.9        100           2
 W tryptophan          2.7         45           2
 Y tyrosine            1.8         31           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADAM metallopeptidase with thrombospondin type 1 mot... 
ADAMTS12              0.322   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS6               0.200   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS10              0.181   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS18              0.171   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS16              0.170   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS19              0.155   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS17              0.153   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS9               0.146   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS20              0.140   a disintegrin-like and metalloprotease with thrombo...
ADAMTS14              0.134   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS14              0.133   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS2               0.131   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS3               0.130   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS15              0.128   a disintegrin-like and metalloprotease (reprolysin t...
ADAMTS1               0.126   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS8               0.118   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS5               0.103   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS4               0.097   ADAM metallopeptidase with thrombospondin type 1 mo...
LOC100291699          0.095   PREDICTED: similar to hCG1991431 
ADAMTS13              0.091   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.091   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.084   ADAM metallopeptidase with thrombospondin type 1 mot...
PAPLN                 0.078   papilin 
ADAMTSL4              0.066   thrombospondin repeat containing 1 isoform 1 
ADAMTSL4              0.066   thrombospondin repeat containing 1 isoform 2 
ADAMTS2               0.059   ADAM metallopeptidase with thrombospondin type 1 mot...
THSD4                 0.057   thrombospondin, type I, domain containing 4 
ADAMTSL3              0.057   ADAMTS-like 3 precursor 
ADAMTSL1              0.057   ADAMTS-like 1 isoform 4 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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