LOC100130716 23506

Name: LOC100130716	Sequence: fasta or formatted (587aa)		NCBI GI: 239758148
Description: PREDICTED: similar to mucin 11		Referenced in: Mucins
Other entries for this name: alt prot [456aa] PREDICTED: similar to Mucin-12
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 34 2 C cysteine 0.5 3 1 D aspartate 1.9 11 1 E glutamate 5.3 31 2 F phenylalanine 2.4 14 1 G glycine 6.8 40 1 H histidine 6.0 35 1 I isoleucine 1.4 8 1 K lysine 0.9 5 1 L leucine 4.4 26 2 M methionine 0.5 3 1 N asparagine 0.3 2 1 P proline 9.2 54 2 Q glutamine 1.5 9 1 R arginine 2.6 15 1 S serine 24.0 141 2 T threonine 22.7 133 3 V valine 2.2 13 1 W tryptophan 0.2 1 1 Y tyrosine 1.5 9 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to mucin 11 LOC100130716 0.739 PREDICTED: similar to Mucin-12 MUC12 0.722 PREDICTED: mucin 12 MUC12 0.718 PREDICTED: mucin 12, cell surface associated MUC12 0.592 PREDICTED: mucin 12 LOC100133714 0.462 PREDICTED: similar to Mucin-12, partial MUC12 0.370 PREDICTED: mucin 12 LOC729792 0.127 PREDICTED: hypothetical protein LOC729792 0.127 PREDICTED: hypothetical protein LOC729792 0.127 PREDICTED: hypothetical protein LOC100294501 0.127 PREDICTED: hypothetical protein LOC100294238 0.127 PREDICTED: hypothetical protein LOC100294204 0.127 PREDICTED: hypothetical protein LOC100294136 0.127 PREDICTED: hypothetical protein LOC100294091 0.127 PREDICTED: hypothetical protein LOC730401 0.127 PREDICTED: hypothetical protein LOC100294249 0.126 PREDICTED: hypothetical protein XP_002344067 MUC17 0.126 mucin 17 MUC5B 0.121 mucin 5, subtype B, tracheobronchial MUC3A 0.120 PREDICTED: mucin 3A, cell surface associated, parti... MUC5AC 0.113 mucin 5AC LOC100134138 0.113 PREDICTED: similar to mucin, partial MUC3A 0.106 PREDICTED: mucin 3A, intestinal MUC2 0.105 mucin 2 precursor LOC100133408 0.105 PREDICTED: similar to mucin MUC6 0.105 mucin 6, gastric MUC3B 0.100 PREDICTED: mucin 3B, cell surface associated, parti... MUC21 0.095 mucin 21 MUC4 0.092 mucin 4 isoform a LOC100294420 0.089 PREDICTED: similar to mucin 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.