POLR2A 29177

Name: POLR2A	Sequence: fasta or formatted (1970aa)		NCBI GI: 4505939
Description: DNA-directed RNA polymerase II A		Referenced in: RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.7 93 3 C cysteine 1.2 24 1 D aspartate 4.7 92 3 E glutamate 5.8 114 4 F phenylalanine 2.9 57 3 G glycine 6.5 128 3 H histidine 2.1 42 1 I isoleucine 5.0 98 3 K lysine 5.3 105 3 L leucine 7.1 139 3 M methionine 2.8 56 2 N asparagine 4.1 81 2 P proline 10.1 198 2 Q glutamine 3.1 61 2 R arginine 5.0 98 2 S serine 11.5 226 2 T threonine 7.6 149 2 V valine 5.6 110 3 W tryptophan 0.7 14 1 Y tyrosine 4.3 85 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 DNA-directed RNA polymerase II A POLR3A 0.137 polymerase (RNA) III (DNA directed) polypeptide A, 1... POLR1A 0.100 DNA-directed RNA polymerase I A NACA 0.053 nascent polypeptide-associated complex alpha subuni... ZAN 0.043 zonadhesin isoform 3 ZAN 0.043 zonadhesin isoform 6 MUC2 0.037 mucin 2 precursor PRG4 0.034 proteoglycan 4 isoform D PRG4 0.034 proteoglycan 4 isoform C PRG4 0.034 proteoglycan 4 isoform B PRG4 0.034 proteoglycan 4 isoform A LOC100134663 0.026 PREDICTED: hypothetical protein, partial MAGEC1 0.026 melanoma antigen family C, 1 LOC284297 0.026 hypothetical protein LOC284297 FAM65A 0.026 hypothetical protein LOC79567 SF3A2 0.025 splicing factor 3a, subunit 2 FLJ22184 0.024 PREDICTED: hypothetical protein FLJ22184 LOC100294420 0.024 PREDICTED: similar to mucin 2 LOC647546 0.024 PREDICTED: hypothetical protein ATN1 0.024 atrophin-1 ATN1 0.024 atrophin-1 LOC100128719 0.024 PREDICTED: hypothetical protein, partial LOC100128719 0.024 PREDICTED: hypothetical protein, partial FLJ22184 0.023 PREDICTED: hypothetical protein LOC80164 LOC100133756 0.023 PREDICTED: hypothetical protein, partial MUC6 0.022 mucin 6, gastric ZNF828 0.022 zinc finger protein 828 FLJ22184 0.022 PREDICTED: hypothetical protein FLJ22184 MUC12 0.021 PREDICTED: mucin 12 LOC100134147 0.021 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.