Guide to the Human Genome
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Name: MUC12 Sequence: fasta or formatted (2036aa) NCBI GI: 239508976
Description:

PREDICTED: mucin 12, cell surface associated

Referenced in:

Mucins

Other entries for this name:
alt prot [5478aa] PREDICTED: mucin 12
alt prot [1952aa] PREDICTED: mucin 12
alt prot [978aa] PREDICTED: mucin 12
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9        120           2
 C cysteine            0.7         15           1
 D aspartate           2.4         49           2
 E glutamate           6.4        131           2
 F phenylalanine       2.9         60           1
 G glycine             6.7        137           2
 H histidine           3.8         77           1
 I isoleucine          1.8         36           2
 K lysine              1.6         32           1
 L leucine             6.0        122           3
 M methionine          1.0         20           1
 N asparagine          1.3         27           2
 P proline             8.7        178           2
 Q glutamine           2.2         44           2
 R arginine            3.3         67           2
 S serine             20.4        415           3
 T threonine          19.7        402           3
 V valine              3.2         66           2
 W tryptophan          0.4          8           1
 Y tyrosine            1.5         30           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: mucin 12, cell surface associated 
MUC12                 0.742   PREDICTED: mucin 12 
MUC12                 0.399   PREDICTED: mucin 12 
MUC12                 0.282   PREDICTED: mucin 12 
LOC100133714          0.234   PREDICTED: similar to Mucin-12, partial 
LOC100130716          0.205   PREDICTED: similar to mucin 11 
LOC100130716          0.154   PREDICTED: similar to Mucin-12 
MUC17                 0.139   mucin 17 
LOC729792             0.089   PREDICTED: hypothetical protein 
LOC100294136          0.089   PREDICTED: hypothetical protein 
LOC100294091          0.089   PREDICTED: hypothetical protein 
LOC100294501          0.088   PREDICTED: hypothetical protein 
LOC100294249          0.088   PREDICTED: hypothetical protein XP_002344067 
LOC729792             0.088   PREDICTED: hypothetical protein 
LOC100294238          0.088   PREDICTED: hypothetical protein 
LOC100294204          0.088   PREDICTED: hypothetical protein 
LOC729792             0.087   PREDICTED: hypothetical protein 
LOC730401             0.087   PREDICTED: hypothetical protein 
MUC2                  0.083   mucin 2 precursor 
MUC5AC                0.080   mucin 5AC 
MUC4                  0.080   mucin 4 isoform a 
MUC5B                 0.079   mucin 5, subtype B, tracheobronchial 
MUC3A                 0.077   PREDICTED: mucin 3A, intestinal 
MUC16                 0.064   mucin 16 
MUC6                  0.061   mucin 6, gastric 
MUC3B                 0.059   PREDICTED: mucin 3B, cell surface associated, parti...
LOC100134138          0.054   PREDICTED: similar to mucin, partial 
MUC3A                 0.049   PREDICTED: mucin 3A, cell surface associated, parti...
LOC100294236          0.049   PREDICTED: similar to diffuse panbronchiolitis crit...
LOC100131514          0.045   PREDICTED: similar to hCG1747327, partial 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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