SOX9 30002

Name: SOX9	Sequence: fasta or formatted (509aa)		NCBI GI: 4557853
Description: transcription factor SOX9		Referenced in: SOX Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 36 2 C cysteine 0.4 2 1 D aspartate 4.3 22 1 E glutamate 6.1 31 2 F phenylalanine 2.2 11 1 G glycine 5.9 30 2 H histidine 4.1 21 1 I isoleucine 2.6 13 1 K lysine 4.9 25 2 L leucine 4.9 25 2 M methionine 2.2 11 1 N asparagine 3.1 16 1 P proline 13.8 70 5 Q glutamine 8.8 45 3 R arginine 4.1 21 3 S serine 10.0 51 3 T threonine 6.7 34 2 V valine 4.1 21 1 W tryptophan 1.0 5 1 Y tyrosine 3.7 19 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transcription factor SOX9 SOX10 0.450 SRY (sex determining region Y)-box 10 SOX8 0.346 SRY (sex determining region Y)-box 8 SOX17 0.110 SRY-box 17 SOX18 0.099 SRY-box 18 SOX1 0.095 SRY (sex determining region Y)-box 1 SOX21 0.093 SRY-box 21 SOX7 0.092 SRY-box 7 SOX14 0.091 SRY-box 14 SOX12 0.091 SRY (sex determining region Y)-box 12 SOX2 0.090 sex-determining region Y-box 2 SOX4 0.090 SRY (sex determining region Y)-box 4 SOX15 0.086 SRY-box 15 SOX11 0.086 SRY-box 11 SOX3 0.082 SRY (sex determining region Y)-box 3 SOX5 0.081 SRY (sex determining region Y)-box 5 isoform c [Homo... SOX5 0.081 SRY (sex determining region Y)-box 5 isoform b [Homo... SOX5 0.081 SRY (sex determining region Y)-box 5 isoform a [Homo... SOX30 0.077 SRY (sex determining region Y)-box 30 isoform a [Hom... SOX13 0.072 SRY-box 13 SOX6 0.069 SRY (sex determining region Y)-box 6 isoform 4 [Hom... SOX6 0.069 SRY (sex determining region Y)-box 6 isoform 3 [Hom... SOX6 0.069 SRY (sex determining region Y)-box 6 isoform 1 [Homo... SOX6 0.069 SRY (sex determining region Y)-box 6 isoform 2 [Homo... SRY 0.068 sex determining region Y SOX30 0.059 SRY (sex determining region Y)-box 30 isoform b [Homo... CIC 0.049 capicua homolog TCF7L1 0.046 HMG-box transcription factor TCF-3 HMGB3 0.037 high-mobility group box 3 POU6F2 0.034 POU domain, class 6, transcription factor 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.