TCF7L1 3552

Name: TCF7L1	Sequence: fasta or formatted (588aa)		NCBI GI: 13786123
Description: HMG-box transcription factor TCF-3		Referenced in: SOX Family T cells
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.7 57 3 C cysteine 0.5 3 1 D aspartate 3.2 19 2 E glutamate 5.1 30 3 F phenylalanine 2.0 12 2 G glycine 7.5 44 10 H histidine 3.7 22 2 I isoleucine 1.9 11 1 K lysine 5.8 34 4 L leucine 9.2 54 2 M methionine 2.4 14 1 N asparagine 1.9 11 1 P proline 13.4 79 2 Q glutamine 6.0 35 3 R arginine 3.7 22 2 S serine 12.6 74 4 T threonine 3.6 21 2 V valine 4.4 26 2 W tryptophan 0.7 4 1 Y tyrosine 2.7 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 HMG-box transcription factor TCF-3 TCF7L2 0.551 transcription factor 7-like 2 isoform 5 TCF7L2 0.546 transcription factor 7-like 2 isoform 2 TCF7L2 0.540 transcription factor 7-like 2 isoform 1 TCF7L2 0.491 transcription factor 7-like 2 isoform 6 TCF7L2 0.479 transcription factor 7-like 2 isoform 4 TCF7L2 0.475 transcription factor 7-like 2 isoform 3 LEF1 0.317 lymphoid enhancer-binding factor 1 isoform 1 LEF1 0.286 lymphoid enhancer-binding factor 1 isoform 3 LEF1 0.286 lymphoid enhancer-binding factor 1 isoform 2 TCF7 0.202 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 0.180 transcription factor 7 (T-cell specific, HMG-box) 5... TCF7 0.158 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 0.158 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 0.157 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 0.157 transcription factor 7 (T-cell specific, HMG-box) 6... TCF7 0.157 transcription factor 7 (T-cell specific, HMG-box) is... SOX9 0.041 transcription factor SOX9 CIC 0.036 capicua homolog SOX30 0.035 SRY (sex determining region Y)-box 30 isoform a [Hom... SOX13 0.035 SRY-box 13 SOX6 0.034 SRY (sex determining region Y)-box 6 isoform 4 [Hom... SOX6 0.034 SRY (sex determining region Y)-box 6 isoform 3 [Hom... SOX6 0.034 SRY (sex determining region Y)-box 6 isoform 1 [Homo... SOX6 0.034 SRY (sex determining region Y)-box 6 isoform 2 [Homo... WIPF1 0.034 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.034 WAS/WASL interacting protein family, member 1 SOX10 0.034 SRY (sex determining region Y)-box 10 SOX30 0.032 SRY (sex determining region Y)-box 30 isoform b [Homo... SOX21 0.031 SRY-box 21 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.