SOX5 15890

Name: SOX5	Sequence: fasta or formatted (750aa)		NCBI GI: 23308715
Description: SRY (sex determining region Y)-box 5 isoform b		Referenced in: SOX Family
Other entries for this name: alt prot [763aa] SRY (sex determining region Y)-box 5 isoform a alt prot [377aa] SRY (sex determining region Y)-box 5 isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 64 6 C cysteine 0.5 4 1 D aspartate 4.1 31 2 E glutamate 8.1 61 4 F phenylalanine 1.7 13 1 G glycine 6.8 51 2 H histidine 2.5 19 1 I isoleucine 4.1 31 1 K lysine 6.9 52 2 L leucine 8.1 61 2 M methionine 3.3 25 2 N asparagine 3.7 28 2 P proline 7.9 59 3 Q glutamine 8.4 63 4 R arginine 4.5 34 2 S serine 8.9 67 3 T threonine 4.4 33 2 V valine 4.4 33 2 W tryptophan 0.4 3 1 Y tyrosine 2.4 18 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SRY (sex determining region Y)-box 5 isoform b [Homo... SOX5 1.000 SRY (sex determining region Y)-box 5 isoform a [Homo... SOX6 0.558 SRY (sex determining region Y)-box 6 isoform 3 [Hom... SOX6 0.558 SRY (sex determining region Y)-box 6 isoform 1 [Homo... SOX6 0.554 SRY (sex determining region Y)-box 6 isoform 2 [Homo... SOX6 0.547 SRY (sex determining region Y)-box 6 isoform 4 [Hom... SOX5 0.497 SRY (sex determining region Y)-box 5 isoform c [Homo... SOX13 0.277 SRY-box 13 SOX17 0.059 SRY-box 17 SOX7 0.057 SRY-box 7 SOX9 0.057 transcription factor SOX9 SOX1 0.055 SRY (sex determining region Y)-box 1 SOX11 0.055 SRY-box 11 SOX14 0.055 SRY-box 14 SOX3 0.054 SRY (sex determining region Y)-box 3 SOX18 0.053 SRY-box 18 SOX12 0.053 SRY (sex determining region Y)-box 12 SOX4 0.052 SRY (sex determining region Y)-box 4 SOX21 0.052 SRY-box 21 SOX2 0.052 sex-determining region Y-box 2 SOX10 0.051 SRY (sex determining region Y)-box 10 SOX8 0.050 SRY (sex determining region Y)-box 8 SRY 0.050 sex determining region Y SOX15 0.050 SRY-box 15 SOX30 0.039 SRY (sex determining region Y)-box 30 isoform b [Homo... SOX30 0.039 SRY (sex determining region Y)-box 30 isoform a [Hom... CIC 0.032 capicua homolog MLL2 0.027 myeloid/lymphoid or mixed-lineage leukemia 2 LEF1 0.026 lymphoid enhancer-binding factor 1 isoform 3 TCF7L2 0.025 transcription factor 7-like 2 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.