SOX6 35106

Name: SOX6	Sequence: fasta or formatted (804aa)		NCBI GI: 70909338
Description: SRY (sex determining region Y)-box 6 isoform 1		Referenced in: SOX Family
Other entries for this name: alt prot [801aa] SRY (sex determining region Y)-box 6 isoform 3 alt prot [841aa] SRY (sex determining region Y)-box 6 isoform 4 alt prot [808aa] SRY (sex determining region Y)-box 6 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 59 6 C cysteine 0.9 7 1 D aspartate 4.6 37 2 E glutamate 7.5 60 2 F phenylalanine 1.7 14 2 G glycine 6.0 48 2 H histidine 1.9 15 1 I isoleucine 4.2 34 1 K lysine 6.7 54 2 L leucine 7.6 61 2 M methionine 4.0 32 1 N asparagine 3.7 30 2 P proline 7.3 59 2 Q glutamine 9.0 72 5 R arginine 5.2 42 2 S serine 9.8 79 2 T threonine 6.2 50 3 V valine 3.2 26 2 W tryptophan 0.7 6 1 Y tyrosine 2.4 19 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SRY (sex determining region Y)-box 6 isoform 1 [Homo... SOX6 0.996 SRY (sex determining region Y)-box 6 isoform 3 [Hom... SOX6 0.959 SRY (sex determining region Y)-box 6 isoform 4 [Hom... SOX6 0.923 SRY (sex determining region Y)-box 6 isoform 2 [Homo... SOX5 0.519 SRY (sex determining region Y)-box 5 isoform a [Homo... SOX5 0.518 SRY (sex determining region Y)-box 5 isoform b [Homo... SOX5 0.251 SRY (sex determining region Y)-box 5 isoform c [Homo... SOX13 0.213 SRY-box 13 SOX17 0.053 SRY-box 17 SOX7 0.051 SRY-box 7 SOX18 0.050 SRY-box 18 SOX4 0.049 SRY (sex determining region Y)-box 4 SOX11 0.049 SRY-box 11 SOX1 0.049 SRY (sex determining region Y)-box 1 SOX14 0.047 SRY-box 14 SOX12 0.047 SRY (sex determining region Y)-box 12 SOX2 0.047 sex-determining region Y-box 2 SOX21 0.047 SRY-box 21 SOX3 0.047 SRY (sex determining region Y)-box 3 SOX8 0.046 SRY (sex determining region Y)-box 8 SOX9 0.046 transcription factor SOX9 SOX10 0.046 SRY (sex determining region Y)-box 10 SRY 0.046 sex determining region Y SOX15 0.044 SRY-box 15 SOX30 0.040 SRY (sex determining region Y)-box 30 isoform a [Hom... SOX30 0.037 SRY (sex determining region Y)-box 30 isoform b [Homo... CIC 0.027 capicua homolog TCF7L2 0.026 transcription factor 7-like 2 isoform 1 TCF7L2 0.026 transcription factor 7-like 2 isoform 2 TCF7L2 0.026 transcription factor 7-like 2 isoform 6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.