SOX6 15033

Name: SOX6	Sequence: fasta or formatted (841aa)		NCBI GI: 224967054
Description: SRY (sex determining region Y)-box 6 isoform 4		Referenced in: SOX Family
Other entries for this name: alt prot [801aa] SRY (sex determining region Y)-box 6 isoform 3 alt prot [804aa] SRY (sex determining region Y)-box 6 isoform 1 alt prot [808aa] SRY (sex determining region Y)-box 6 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 59 6 C cysteine 0.8 7 1 D aspartate 4.6 39 2 E glutamate 7.3 61 2 F phenylalanine 1.9 16 2 G glycine 6.5 55 3 H histidine 2.5 21 1 I isoleucine 4.3 36 1 K lysine 6.7 56 2 L leucine 7.6 64 2 M methionine 3.8 32 1 N asparagine 3.9 33 2 P proline 7.1 60 2 Q glutamine 8.8 74 5 R arginine 5.5 46 2 S serine 9.6 81 2 T threonine 5.9 50 3 V valine 3.2 27 2 W tryptophan 0.6 5 1 Y tyrosine 2.3 19 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SRY (sex determining region Y)-box 6 isoform 4 [Hom... SOX6 0.949 SRY (sex determining region Y)-box 6 isoform 2 [Homo... SOX6 0.913 SRY (sex determining region Y)-box 6 isoform 1 [Homo... SOX6 0.912 SRY (sex determining region Y)-box 6 isoform 3 [Hom... SOX5 0.485 SRY (sex determining region Y)-box 5 isoform a [Homo... SOX5 0.484 SRY (sex determining region Y)-box 5 isoform b [Homo... SOX5 0.242 SRY (sex determining region Y)-box 5 isoform c [Homo... SOX13 0.125 SRY-box 13 SOX17 0.051 SRY-box 17 SOX7 0.048 SRY-box 7 SOX18 0.048 SRY-box 18 SOX4 0.047 SRY (sex determining region Y)-box 4 SOX11 0.047 SRY-box 11 SOX1 0.046 SRY (sex determining region Y)-box 1 SOX14 0.045 SRY-box 14 SOX12 0.045 SRY (sex determining region Y)-box 12 SOX2 0.045 sex-determining region Y-box 2 SOX21 0.045 SRY-box 21 SOX3 0.045 SRY (sex determining region Y)-box 3 SOX8 0.044 SRY (sex determining region Y)-box 8 SOX9 0.043 transcription factor SOX9 SOX10 0.043 SRY (sex determining region Y)-box 10 SRY 0.043 sex determining region Y SOX15 0.042 SRY-box 15 SOX30 0.038 SRY (sex determining region Y)-box 30 isoform a [Hom... SOX30 0.035 SRY (sex determining region Y)-box 30 isoform b [Homo... CIC 0.026 capicua homolog TCF7L2 0.025 transcription factor 7-like 2 isoform 1 TCF7L2 0.025 transcription factor 7-like 2 isoform 2 TCF7L2 0.025 transcription factor 7-like 2 isoform 6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.