SOX18 37093

Name: SOX18	Sequence: fasta or formatted (384aa)		NCBI GI: 8924248
Description: SRY-box 18		Referenced in: SOX Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 16.1 62 3 C cysteine 1.6 6 1 D aspartate 4.7 18 2 E glutamate 6.5 25 2 F phenylalanine 2.3 9 2 G glycine 8.1 31 2 H histidine 1.3 5 1 I isoleucine 0.8 3 1 K lysine 2.9 11 2 L leucine 10.2 39 3 M methionine 1.3 5 1 N asparagine 1.6 6 1 P proline 16.7 64 3 Q glutamine 2.6 10 2 R arginine 8.9 34 2 S serine 6.2 24 2 T threonine 2.1 8 1 V valine 1.8 7 1 W tryptophan 1.0 4 1 Y tyrosine 3.4 13 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SRY-box 18 SOX17 0.281 SRY-box 17 SOX7 0.254 SRY-box 7 SOX9 0.133 transcription factor SOX9 SOX3 0.128 SRY (sex determining region Y)-box 3 SOX15 0.126 SRY-box 15 SOX2 0.125 sex-determining region Y-box 2 SOX8 0.125 SRY (sex determining region Y)-box 8 SOX10 0.124 SRY (sex determining region Y)-box 10 SOX1 0.124 SRY (sex determining region Y)-box 1 SOX14 0.123 SRY-box 14 SOX12 0.116 SRY (sex determining region Y)-box 12 SOX21 0.114 SRY-box 21 SOX11 0.111 SRY-box 11 SOX4 0.110 SRY (sex determining region Y)-box 4 SOX6 0.102 SRY (sex determining region Y)-box 6 isoform 4 [Hom... SOX6 0.102 SRY (sex determining region Y)-box 6 isoform 3 [Hom... SOX6 0.102 SRY (sex determining region Y)-box 6 isoform 1 [Homo... SOX6 0.102 SRY (sex determining region Y)-box 6 isoform 2 [Homo... SOX5 0.101 SRY (sex determining region Y)-box 5 isoform c [Homo... SOX5 0.101 SRY (sex determining region Y)-box 5 isoform b [Homo... SOX5 0.101 SRY (sex determining region Y)-box 5 isoform a [Homo... SOX13 0.101 SRY-box 13 SRY 0.097 sex determining region Y SOX30 0.071 SRY (sex determining region Y)-box 30 isoform a [Hom... SOX30 0.070 SRY (sex determining region Y)-box 30 isoform b [Homo... CIC 0.055 capicua homolog TCF7 0.049 transcription factor 7 (T-cell specific, HMG-box) 5... MLL2 0.046 myeloid/lymphoid or mixed-lineage leukemia 2 BBX 0.045 HMG-BOX transcription factor BBX isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.