SOX30 25282

Name: SOX30	Sequence: fasta or formatted (753aa)		NCBI GI: 30581117
Description: SRY (sex determining region Y)-box 30 isoform a		Referenced in: SOX Family
Other entries for this name: alt prot [501aa] SRY (sex determining region Y)-box 30 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.4 63 3 C cysteine 0.9 7 1 D aspartate 2.8 21 1 E glutamate 6.8 51 5 F phenylalanine 3.1 23 1 G glycine 5.4 41 2 H histidine 3.1 23 2 I isoleucine 3.1 23 2 K lysine 3.7 28 2 L leucine 8.0 60 3 M methionine 1.2 9 1 N asparagine 3.1 23 2 P proline 13.9 105 3 Q glutamine 5.3 40 2 R arginine 5.6 42 2 S serine 10.2 77 3 T threonine 6.1 46 2 V valine 6.1 46 2 W tryptophan 0.5 4 1 Y tyrosine 2.8 21 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SRY (sex determining region Y)-box 30 isoform a [Hom... SOX30 0.598 SRY (sex determining region Y)-box 30 isoform b [Homo... LOC442142 0.059 PREDICTED: hypothetical protein LOC442142 0.059 PREDICTED: hypothetical protein LOC442142 0.059 PREDICTED: hypothetical protein SOX9 0.053 transcription factor SOX9 SOX14 0.049 SRY-box 14 SOX7 0.044 SRY-box 7 SOX21 0.044 SRY-box 21 SRY 0.042 sex determining region Y SOX15 0.042 SRY-box 15 SOX6 0.042 SRY (sex determining region Y)-box 6 isoform 4 [Hom... SOX6 0.042 SRY (sex determining region Y)-box 6 isoform 3 [Hom... SOX6 0.042 SRY (sex determining region Y)-box 6 isoform 1 [Homo... SOX6 0.042 SRY (sex determining region Y)-box 6 isoform 2 [Homo... SOX2 0.041 sex-determining region Y-box 2 SOX1 0.041 SRY (sex determining region Y)-box 1 SOX11 0.040 SRY-box 11 SOX13 0.040 SRY-box 13 SOX4 0.040 SRY (sex determining region Y)-box 4 SOX8 0.039 SRY (sex determining region Y)-box 8 SOX3 0.039 SRY (sex determining region Y)-box 3 SOX10 0.038 SRY (sex determining region Y)-box 10 SOX12 0.038 SRY (sex determining region Y)-box 12 SOX17 0.038 SRY-box 17 SOX5 0.038 SRY (sex determining region Y)-box 5 isoform c [Homo... SOX5 0.038 SRY (sex determining region Y)-box 5 isoform b [Homo... SOX5 0.038 SRY (sex determining region Y)-box 5 isoform a [Homo... SOX18 0.036 SRY-box 18 TCF7L2 0.032 transcription factor 7-like 2 isoform 5 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.