SOX17 2338

Name: SOX17	Sequence: fasta or formatted (414aa)		NCBI GI: 11967991
Description: SRY-box 17		Referenced in: SOX Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.9 45 3 C cysteine 1.4 6 1 D aspartate 5.6 23 2 E glutamate 5.1 21 2 F phenylalanine 2.4 10 2 G glycine 11.4 47 3 H histidine 4.1 17 2 I isoleucine 1.0 4 1 K lysine 3.4 14 1 L leucine 7.7 32 2 M methionine 3.4 14 1 N asparagine 1.7 7 1 P proline 14.3 59 3 Q glutamine 5.8 24 2 R arginine 5.1 21 3 S serine 6.5 27 2 T threonine 1.7 7 1 V valine 4.3 18 2 W tryptophan 0.7 3 1 Y tyrosine 3.6 15 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SRY-box 17 SOX18 0.255 SRY-box 18 SOX7 0.240 SRY-box 7 SOX9 0.133 transcription factor SOX9 SOX8 0.130 SRY (sex determining region Y)-box 8 SOX3 0.126 SRY (sex determining region Y)-box 3 SOX1 0.124 SRY (sex determining region Y)-box 1 SOX2 0.122 sex-determining region Y-box 2 SOX10 0.116 SRY (sex determining region Y)-box 10 SOX14 0.116 SRY-box 14 SOX21 0.111 SRY-box 21 SOX15 0.111 SRY-box 15 SOX11 0.105 SRY-box 11 SOX12 0.105 SRY (sex determining region Y)-box 12 SOX13 0.104 SRY-box 13 SOX4 0.104 SRY (sex determining region Y)-box 4 SOX5 0.102 SRY (sex determining region Y)-box 5 isoform c [Homo... SOX5 0.102 SRY (sex determining region Y)-box 5 isoform b [Homo... SOX5 0.102 SRY (sex determining region Y)-box 5 isoform a [Homo... SOX6 0.098 SRY (sex determining region Y)-box 6 isoform 4 [Hom... SOX6 0.098 SRY (sex determining region Y)-box 6 isoform 3 [Hom... SOX6 0.098 SRY (sex determining region Y)-box 6 isoform 1 [Homo... SOX6 0.098 SRY (sex determining region Y)-box 6 isoform 2 [Homo... SRY 0.095 sex determining region Y SOX30 0.067 SRY (sex determining region Y)-box 30 isoform b [Homo... SOX30 0.067 SRY (sex determining region Y)-box 30 isoform a [Hom... CIC 0.048 capicua homolog TCF7L2 0.046 transcription factor 7-like 2 isoform 5 TCF7L2 0.043 transcription factor 7-like 2 isoform 1 BBX 0.042 HMG-BOX transcription factor BBX isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.