SOX4 29496

Name: SOX4	Sequence: fasta or formatted (474aa)		NCBI GI: 4507163
Description: SRY (sex determining region Y)-box 4		Referenced in: SOX Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 14.3 68 7 C cysteine 0.8 4 1 D aspartate 5.1 24 2 E glutamate 4.9 23 3 F phenylalanine 2.5 12 1 G glycine 14.1 67 7 H histidine 2.5 12 2 I isoleucine 2.1 10 1 K lysine 6.1 29 2 L leucine 6.5 31 2 M methionine 1.7 8 1 N asparagine 2.7 13 2 P proline 6.1 29 1 Q glutamine 1.3 6 2 R arginine 3.6 17 2 S serine 18.1 86 7 T threonine 2.1 10 1 V valine 2.5 12 1 W tryptophan 0.8 4 1 Y tyrosine 1.9 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SRY (sex determining region Y)-box 4 SOX11 0.290 SRY-box 11 SOX12 0.179 SRY (sex determining region Y)-box 12 SOX1 0.130 SRY (sex determining region Y)-box 1 SOX21 0.124 SRY-box 21 SOX8 0.114 SRY (sex determining region Y)-box 8 SOX15 0.112 SRY-box 15 SOX3 0.112 SRY (sex determining region Y)-box 3 SOX10 0.105 SRY (sex determining region Y)-box 10 SOX14 0.105 SRY-box 14 SOX7 0.103 SRY-box 7 SOX9 0.103 transcription factor SOX9 SOX2 0.103 sex-determining region Y-box 2 SOX17 0.097 SRY-box 17 SOX18 0.093 SRY-box 18 SOX13 0.086 SRY-box 13 SOX6 0.085 SRY (sex determining region Y)-box 6 isoform 4 [Hom... SOX6 0.085 SRY (sex determining region Y)-box 6 isoform 3 [Hom... SOX6 0.085 SRY (sex determining region Y)-box 6 isoform 1 [Homo... SOX6 0.085 SRY (sex determining region Y)-box 6 isoform 2 [Homo... SOX5 0.084 SRY (sex determining region Y)-box 5 isoform c [Homo... SOX5 0.084 SRY (sex determining region Y)-box 5 isoform b [Homo... SOX5 0.084 SRY (sex determining region Y)-box 5 isoform a [Homo... SRY 0.082 sex determining region Y SOX30 0.066 SRY (sex determining region Y)-box 30 isoform b [Homo... SOX30 0.066 SRY (sex determining region Y)-box 30 isoform a [Hom... ARID1B 0.066 AT rich interactive domain 1B (SWI1-like) isoform 2 ... ARID1B 0.066 AT rich interactive domain 1B (SWI1-like) isoform 1 ... ARID1B 0.066 AT rich interactive domain 1B (SWI1-like) isoform 3 ... LOR 0.060 loricrin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.