CIC 985

Name: CIC	Sequence: fasta or formatted (1608aa)		NCBI GI: 112421108
Description: capicua homolog		Referenced in: Additional Brain Proteins SOX Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.8 190 3 C cysteine 0.6 10 1 D aspartate 3.1 50 3 E glutamate 5.2 83 3 F phenylalanine 2.5 40 2 G glycine 9.9 159 3 H histidine 1.3 21 1 I isoleucine 1.9 31 2 K lysine 4.1 66 2 L leucine 6.4 103 2 M methionine 1.2 19 1 N asparagine 1.2 20 1 P proline 16.6 267 4 Q glutamine 4.0 65 2 R arginine 4.7 76 3 S serine 11.5 185 4 T threonine 6.7 108 2 V valine 5.4 87 2 W tryptophan 0.6 9 2 Y tyrosine 1.2 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 capicua homolog LOC442676 0.069 PREDICTED: hypothetical protein LOC442676 LOC442676 0.069 PREDICTED: hypothetical protein LOC442676 LOC442676 0.069 PREDICTED: hypothetical protein LOC442676 LOC442676 0.069 PREDICTED: hypothetical protein LOC442676 LOC100288667 0.061 PREDICTED: hypothetical protein XP_002344293 LOC100130600 0.061 PREDICTED: similar to hCG2014367 LOC100130600 0.061 PREDICTED: similar to hCG2014367 LOC100130600 0.061 PREDICTED: hypothetical protein LOC100130600 LOC100130600 0.061 PREDICTED: similar to hCG2014367 LOC648262 0.058 PREDICTED: hypothetical protein LOC100289067 0.053 PREDICTED: hypothetical protein XP_002342619 NACA 0.047 nascent polypeptide-associated complex alpha subuni... FLJ22184 0.040 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.036 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.035 PREDICTED: hypothetical protein LOC80164 SRCAP 0.032 Snf2-related CBP activator protein GLTSCR1 0.031 glioma tumor suppressor candidate region gene 1 [Ho... LOC648262 0.029 PREDICTED: similar to hCG1996386 LOC648262 0.029 PREDICTED: similar to hCG1996386 MBD6 0.028 methyl-CpG binding domain protein 6 PRG4 0.028 proteoglycan 4 isoform D PRG4 0.028 proteoglycan 4 isoform C PRG4 0.028 proteoglycan 4 isoform B PRG4 0.028 proteoglycan 4 isoform A MUC2 0.028 mucin 2 precursor BBX 0.026 HMG-BOX transcription factor BBX isoform 1 BBX 0.026 HMG-BOX transcription factor BBX isoform 2 PRR12 0.026 proline rich 12 COL1A1 0.025 alpha 1 type I collagen preproprotein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.