PKHD1L1 2847

Name: PKHD1L1	Sequence: fasta or formatted (4243aa)		NCBI GI: 126116589
Description: fibrocystin L		Referenced in: Kidney Semaphorins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 224 2 C cysteine 2.0 85 2 D aspartate 4.5 189 2 E glutamate 4.8 203 2 F phenylalanine 4.5 190 2 G glycine 8.8 372 3 H histidine 2.7 115 2 I isoleucine 7.5 319 2 K lysine 3.7 156 2 L leucine 7.7 328 3 M methionine 1.8 78 2 N asparagine 6.2 263 3 P proline 4.9 207 2 Q glutamine 3.8 161 2 R arginine 3.5 147 2 S serine 8.5 361 5 T threonine 7.4 316 3 V valine 7.4 316 3 W tryptophan 1.5 65 1 Y tyrosine 3.5 148 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 fibrocystin L PKHD1 0.085 fibrocystin isoform 1 PKHD1 0.077 fibrocystin isoform 2 TMEM2 0.016 transmembrane protein 2 isoform a TMEM2 0.014 transmembrane protein 2 isoform b KIAA1199 0.013 KIAA1199 MET 0.005 met proto-oncogene isoform b precursor PLXNA2 0.005 plexin A2 PLXNA3 0.005 plexin A3 PLXNA4 0.005 plexin A4 isoform 1 PLXNA1 0.005 plexin A1 MET 0.005 met proto-oncogene isoform a precursor PLXND1 0.005 plexin D1 PLXNB1 0.004 plexin B1 PLXNB1 0.004 plexin B1 PLXNB2 0.003 plexin B2 PLXNB3 0.003 plexin B3 isoform 2 PLXNB3 0.003 plexin B3 isoform 1 MST1R 0.002 macrophage stimulating 1 receptor precursor GPX2 0.001 glutathione peroxidase 2 PKD1 0.001 polycystin 1 isoform 2 precursor PKD1 0.001 polycystin 1 isoform 1 precursor NFATC4 0.001 nuclear factor of activated T-cells, cytoplasmic, c... NFATC4 0.001 nuclear factor of activated T-cells, cytoplasmic, ca... MLLT10 0.001 myeloid/lymphoid or mixed-lineage leukemia transloca... MLLT10 0.001 myeloid/lymphoid or mixed-lineage leukemia translocat... EBF1 0.001 early B-cell factor EBF3 0.001 early B-cell factor 3 EBF2 0.001 early B-cell factor 2 SLAIN2 0.001 SLAIN motif family, member 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.