Guide to the Human Genome
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Search of human proteins with 4506969

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4506969 signaling lymphocytic activation molecule family
member 1 [Homo sapiens]
         (335 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4506969 signaling lymphocytic activation molecule family memb...   677   0.0  
gi|7706529 CD244 natural killer cell receptor 2B4 [Homo sapiens]       75   1e-13
gi|9910342 SLAM family member 8 [Homo sapiens]                         69   8e-12
gi|4502687 CD84 molecule [Homo sapiens]                                62   7e-10
gi|226342990 SLAM family member 9 isoform 1 [Homo sapiens]             60   2e-09
gi|19923572 SLAM family member 7 [Homo sapiens]                        60   4e-09
gi|21361571 CD48 molecule [Homo sapiens]                               58   1e-08
gi|16418407 activating NK receptor precursor [Homo sapiens]            57   2e-08
gi|55925578 lymphocyte antigen 9 isoform a [Homo sapiens]              52   1e-06
gi|148612793 carcinoembryonic antigen-related cell adhesion mole...    50   4e-06
gi|52317156 carcinoembryonic antigen-related cell adhesion molec...    47   2e-05
gi|121674801 hepatocyte cell adhesion molecule [Homo sapiens]          42   0.001
gi|7657570 sialic acid binding Ig-like lectin 7 isoform 1 [Homo ...    39   0.005
gi|5360210 poliovirus receptor related 2 isoform alpha precursor...    38   0.011
gi|205830473 sialic acid binding Ig-like lectin 11 isoform 2 [Ho...    38   0.011
gi|205830470 sialic acid binding Ig-like lectin 11 isoform 1 [Ho...    38   0.011
gi|23943856 sialic acid binding Ig-like lectin 9 [Homo sapiens]        38   0.015
gi|94538343 sialic acid binding Ig-like lectin 8 [Homo sapiens]        37   0.025
gi|68161541 carcinoembryonic antigen-related cell adhesion molec...    36   0.055
gi|19923195 carcinoembryonic antigen-related cell adhesion molec...    36   0.055
gi|193794821 sialic acid binding Ig-like lectin 6 isoform 1 prec...    35   0.094
gi|193794819 sialic acid binding Ig-like lectin 6 isoform 2 prec...    35   0.094
gi|193794817 sialic acid binding Ig-like lectin 6 isoform 3 prec...    35   0.094
gi|37700249 HEPACAM family member 2 isoform 2 [Homo sapiens]           35   0.094
gi|42560237 poliovirus receptor-related 1 isoform 1 [Homo sapiens]     35   0.12 
gi|86439957 HEPACAM family member 2 isoform 1 [Homo sapiens]           35   0.12 
gi|110349719 titin isoform N2-A [Homo sapiens]                         33   0.27 
gi|38490688 immunoglobulin superfamily, member 10 [Homo sapiens]       33   0.27 
gi|157805480 pregnancy specific beta-1-glycoprotein 7 precursor ...    33   0.27 
gi|112789532 poliovirus receptor related 2 isoform delta precurs...    33   0.36 

>gi|4506969 signaling lymphocytic activation molecule family member
           1 [Homo sapiens]
          Length = 335

 Score =  677 bits (1746), Expect = 0.0
 Identities = 335/335 (100%), Positives = 335/335 (100%)

Query: 1   MDPKGLLSLTFVLFLSLAFGASYGTGGRMMNCPKILRQLGSKVLLPLTYERINKSMNKSI 60
           MDPKGLLSLTFVLFLSLAFGASYGTGGRMMNCPKILRQLGSKVLLPLTYERINKSMNKSI
Sbjct: 1   MDPKGLLSLTFVLFLSLAFGASYGTGGRMMNCPKILRQLGSKVLLPLTYERINKSMNKSI 60

Query: 61  HIVVTMAKSLENSVENKIVSLDPSEAGPPRYLGDRYKFYLENLTLGIRESRKEDEGWYLM 120
           HIVVTMAKSLENSVENKIVSLDPSEAGPPRYLGDRYKFYLENLTLGIRESRKEDEGWYLM
Sbjct: 61  HIVVTMAKSLENSVENKIVSLDPSEAGPPRYLGDRYKFYLENLTLGIRESRKEDEGWYLM 120

Query: 121 TLEKNVSVQRFCLQLRLYEQVSTPEIKVLNKTQENGTCTLILGCTVEKGDHVAYSWSEKA 180
           TLEKNVSVQRFCLQLRLYEQVSTPEIKVLNKTQENGTCTLILGCTVEKGDHVAYSWSEKA
Sbjct: 121 TLEKNVSVQRFCLQLRLYEQVSTPEIKVLNKTQENGTCTLILGCTVEKGDHVAYSWSEKA 180

Query: 181 GTHPLNPANSSHLLSLTLGPQHADNIYICTVSNPISNNSQTFSPWPGCRTDPSETKPWAV 240
           GTHPLNPANSSHLLSLTLGPQHADNIYICTVSNPISNNSQTFSPWPGCRTDPSETKPWAV
Sbjct: 181 GTHPLNPANSSHLLSLTLGPQHADNIYICTVSNPISNNSQTFSPWPGCRTDPSETKPWAV 240

Query: 241 YAGLLGGVIMILIMVVILQLRRRGKTNHYQTTVEKKSLTIYAQVQKPGPLQKKLDSFPAQ 300
           YAGLLGGVIMILIMVVILQLRRRGKTNHYQTTVEKKSLTIYAQVQKPGPLQKKLDSFPAQ
Sbjct: 241 YAGLLGGVIMILIMVVILQLRRRGKTNHYQTTVEKKSLTIYAQVQKPGPLQKKLDSFPAQ 300

Query: 301 DPCTTIYVAATEPVPESVQETNSITVYASVTLPES 335
           DPCTTIYVAATEPVPESVQETNSITVYASVTLPES
Sbjct: 301 DPCTTIYVAATEPVPESVQETNSITVYASVTLPES 335


>gi|7706529 CD244 natural killer cell receptor 2B4 [Homo sapiens]
          Length = 365

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 65/279 (23%), Positives = 122/279 (43%), Gaps = 25/279 (8%)

Query: 72  NSVENKIVSLD-----PSEAG------------PPRYLGDRYKFYLENLTLGIRESRKED 114
           NS++ K+ S+      PS+ G            P     DR+ F ++NL+L I+ ++++D
Sbjct: 42  NSIQTKVDSIAWKKLLPSQNGFHHILKWENGSLPSNTSNDRFSFIVKNLSLLIKAAQQQD 101

Query: 115 EGWYLMTLEK-NVSVQRFCLQLRLYEQVSTPEIKVLNKTQENGTCTLILGCTVEKGDHVA 173
            G Y + +   +  VQ    Q+ ++++V  P ++   K  + G C + L C V +  +V+
Sbjct: 102 SGLYCLEVTSISGKVQTATFQVFVFDKVEKPRLQGQGKILDRGRCQVALSCLVSRDGNVS 161

Query: 174 YSWSEKAGTHPLNPANSSHLLSLTLGPQHADNIYICTVSNPISNNSQTFSPWPGCRTDPS 233
           Y+W    G+  +  A +   L   +   +  + Y C VSNP+S  S T +    C+    
Sbjct: 162 YAWYR--GSKLIQTAGNLTYLDEEV-DINGTHTYTCNVSNPVSWESHTLNLTQDCQNAHQ 218

Query: 234 ETKPWAVYAGLLGGVIMILIMVVILQLRRRGKTNHYQTTVEKKSLTIYAQVQ--KPGPLQ 291
           E + W     ++    + L  +    + RR +      T  K+ LTIY  V+  K     
Sbjct: 219 EFRFWPFLVIIVILSALFLGTLACFCVWRRKRKEKQSETSPKEFLTIYEDVKDLKTRRNH 278

Query: 292 KKLDSFPAQDPCTTIYVAATEPVPESVQETNSITVYASV 330
           ++  +FP     +TIY            +  + T+Y+ +
Sbjct: 279 EQEQTFPGGG--STIYSMIQSQSSAPTSQEPAYTLYSLI 315


>gi|9910342 SLAM family member 8 [Homo sapiens]
          Length = 285

 Score = 68.6 bits (166), Expect = 8e-12
 Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 10/136 (7%)

Query: 133 LQLRLYEQVSTPEIKVL----NKTQENGTCTLILGCTVEKGDHVAYSWSEKA----GTHP 184
           LQL++Y+ V  P ++V        Q + TC + L C       + YSW  +     G  P
Sbjct: 117 LQLKVYDAVPRPVVQVFIAVERDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEP 176

Query: 185 LNPANSSHLLSLTLGPQHADNIYICTVSNPISNNSQTFSPWPGCRTDPSETKPWAVYAGL 244
            +      +LS++LGP   D  Y C VSNP+S +  T +PW  C  + +  K  A Y  +
Sbjct: 177 HSLFTDGQVLSISLGPGDRDVAYSCIVSNPVSWDLATVTPWDSCHHEAAPGK--ASYKDV 234

Query: 245 LGGVIMILIMVVILQL 260
           L  V+ + ++++++ L
Sbjct: 235 LLVVVPVSLLLMLVTL 250


>gi|4502687 CD84 molecule [Homo sapiens]
          Length = 328

 Score = 62.0 bits (149), Expect = 7e-10
 Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 17/162 (10%)

Query: 102 NLTLGIRESRKEDEGWYLMTLEKNV----SVQRFCLQLRLYEQVSTPEIKVLNKTQENGT 157
           N  L I + R ED G Y   +        + +R+ LQ+  Y ++  P+I        N T
Sbjct: 91  NYNLVISDLRMEDAGDYKADINTQADPYTTTKRYNLQI--YRRLGKPKITQSLMASVNST 148

Query: 158 CTLILGCTVEKGD-HVAYSWSEKAGTHPLNPANSSHLLSLTLGPQHADNIYICTVSNPIS 216
           C + L C+VEK + +V Y+WS      PL      ++L +   P+  +  Y CT  NP+S
Sbjct: 149 CNVTLTCSVEKEEKNVTYNWS------PLG--EEGNVLQIFQTPEDQELTYTCTAQNPVS 200

Query: 217 NNSQTFSPWPGCRTDPSETKPWAVYAGLLGGVIMILIMVVIL 258
           NNS + S    C       +    + GLL  + M  ++V+IL
Sbjct: 201 NNSDSISARQLCADIAMGFR--THHTGLLSVLAMFFLLVLIL 240


>gi|226342990 SLAM family member 9 isoform 1 [Homo sapiens]
          Length = 289

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 60/240 (25%), Positives = 104/240 (43%), Gaps = 25/240 (10%)

Query: 34  KILRQLGSKVLLPLTYERINKSMN-----KSIHIVVTMAKSLENSVENK------IVSLD 82
           ++ R  GS+ ++ +  E I+  +      +  +I+ +  KSL   V  K      I+  +
Sbjct: 20  RLWRWCGSEEVVAVLQESISLPLEIPPDEEVENIIWSSHKSLATVVPGKEGHPATIMVTN 79

Query: 83  PSEAGPPRYLGDRYKFYLENLTLGIRESRKEDEGWYLMTLEKNVSVQRFCLQLRL--YEQ 140
           P   G   +L   Y  ++ NL+        ED G Y   +    S      Q  +  Y  
Sbjct: 80  PHYQGQVSFLDPSYSLHISNLSW-------EDSGLYQAQVNLRTSQISTMQQYNICVYRW 132

Query: 141 VSTPEIKVLNKTQENGTCTLILGCTVEK-GDHVAYSWSEKAGTHPLNPANSSHLLSLTLG 199
           +S P+I V  ++   G C++ L C+VEK G  + YSW  +  +      +   +LS +  
Sbjct: 133 LSEPQITVNFESSGEGACSMSLVCSVEKAGMDMTYSWLSRGDS--TYTFHEGPVLSTSWR 190

Query: 200 PQHADNIYICTVSNPISNNSQTFSPWPGCRTDP--SETKPWAVYAGLLGGVIMILIMVVI 257
           P  +   Y C  +NPISN S    P      DP  +  KP   +  L  G+++ L++V++
Sbjct: 191 PGDSALSYTCRANNPISNVSSCPIPDGPFYADPNYASEKPSTAFCLLAKGLLIFLLLVIL 250


>gi|19923572 SLAM family member 7 [Homo sapiens]
          Length = 335

 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 62/262 (23%), Positives = 119/262 (45%), Gaps = 35/262 (13%)

Query: 94  DRYKFYLENLTLGIRESRKEDEGWYLMTLEKNVSVQRFCLQ---LRLYEQVSTPEIKVLN 150
           +R  F     +L + + +K D G Y + +  + S+Q+   Q   L +YE +S P++ +  
Sbjct: 79  ERVDFPDGGYSLKLSKLKKNDSGIYYVGIYSS-SLQQPSTQEYVLHVYEHLSKPKVTMGL 137

Query: 151 KTQENGTCTLILGCTVEKGDH-VAYSWSEKAGTHPLNPANSSHLLSLTLGPQHADNIYIC 209
           ++ +NGTC   L C +E G+  V Y+W  KA     N +++  +L ++     +D  +IC
Sbjct: 138 QSNKNGTCVTNLTCCMEHGEEDVIYTW--KALGQAANESHNGSILPISWRWGESDMTFIC 195

Query: 210 TVSNPISNNSQTFSP------WPGCRTDPSETKPWAVYAGLLGGVIMILIMVVILQLRRR 263
              NP+S N    SP        G   DP  +        L+  ++ + ++ + L   +R
Sbjct: 196 VARNPVSRNFS--SPILARKLCEGAADDPDSSMVLLCLL-LVPLLLSLFVLGLFLWFLKR 252

Query: 264 GKTNHYQTTVEKKSLTIYAQVQKPGP---LQKKLDSFP-------AQDPCTTIYVAATEP 313
            +   Y    EKK + I  +     P      + D+ P        +DP  T+Y  +T  
Sbjct: 253 ERQEEY--IEEKKRVDICRETPNICPHSGENTEYDTIPHTNRTILKEDPANTVY--STVE 308

Query: 314 VPESVQETNSITVYASVTLPES 335
           +P+ ++  +S+     +T+P++
Sbjct: 309 IPKKMENPHSL-----LTMPDT 325


>gi|21361571 CD48 molecule [Homo sapiens]
          Length = 243

 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 11/169 (6%)

Query: 75  ENKIVSLDPSEAGPPRYLGDRYKFYL----ENLTLGIRESRKEDEGWYLM-TLEKNVSVQ 129
           + KIV  D  ++   +Y   ++K  +    ++  L I + +KED   Y+M  L+K  + Q
Sbjct: 63  DQKIVEWDSRKS---KYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLKKTGNEQ 119

Query: 130 RFCLQLRLYEQVSTPEIKVLNKTQENGTCTLILGCTVEKGDHVAYSWSEKAGTHPLNPAN 189
            + ++L++ + V  P IK+      +  C L L C +  G+ V Y+W       P    N
Sbjct: 120 EWKIKLQVLDPVPKPVIKIEKIEDMDDNCYLKLSCVIP-GESVNYTWYGDKRPFPKELQN 178

Query: 190 SSHLLSLTLGPQHADNIYICTVSNPISNNSQTFSPWPGCRTDPSETKPW 238
           S  +L  TL P +    Y C VSN +S+ + T    P C    S    W
Sbjct: 179 S--VLETTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCTLARSFGVEW 225


>gi|16418407 activating NK receptor precursor [Homo sapiens]
          Length = 331

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 77/336 (22%), Positives = 139/336 (41%), Gaps = 46/336 (13%)

Query: 13  LFLSLAFGASYGTGGRMMNC---PKILRQ-LGSKVLLPLTYERINKSMNKSIHIVVTMAK 68
           LF SL F   +G G  +      P ++   LG  V LPL +    K         V    
Sbjct: 4   LFQSLLFVFCFGPGNVVSQSSLTPLMVNGILGESVTLPLEFPAGEK---------VNFIT 54

Query: 69  SLENSVENKIVSLDPSEAGPPRY------LGDRYKFYLENLTLGIRESRKEDEGWYLMTL 122
            L N  E  +  + P E   P         G R  F  ++ +L +   + ED G Y   +
Sbjct: 55  WLFN--ETSLAFIVPHETKSPEIHVTNPKQGKRLNF-TQSYSLQLSNLKMEDTGSYRAQI 111

Query: 123 EKNVSVQRFCLQLRLYEQVSTPEIKVLNKTQENGTCTLILGCTVEKG-DHVAYSWSEKAG 181
               S +     LR+  Q+   ++   ++  +N TC L L C+VE   D+V++ W E  G
Sbjct: 112 STKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRW-EALG 170

Query: 182 THPLNPANSSHLLSLTLGPQ-HADNIYICTVSNPISNNSQTFSPWPGCRTDPSETKPWAV 240
               N  +S   L+++  P+  ++  Y C   N +SN S + S    C     +     +
Sbjct: 171 ----NTLSSQPNLTVSWDPRISSEQDYTCIAENAVSNLSFSVSAQKLCEDVKIQYTDTKM 226

Query: 241 YAGLLGGVIMI--LIMVVILQLRRRGKTNHYQTTVEKKSLTIYAQVQKPGPLQKKLDSFP 298
              ++ G+ ++   I++++L LR+R           + SL++  Q  +     + L+   
Sbjct: 227 ILFMVSGICIVFGFIILLLLVLRKR-----------RDSLSLSTQRTQGPESARNLEYVS 275

Query: 299 AQDPCTTIYVAATEPVPE----SVQETNSITVYASV 330
                 T+Y + T    E    + +E ++IT+Y+++
Sbjct: 276 VSPTNNTVYASVTHSNRETEIWTPRENDTITIYSTI 311


>gi|55925578 lymphocyte antigen 9 isoform a [Homo sapiens]
          Length = 655

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 19/214 (8%)

Query: 10  TFVLFLSLAFGASYGTGGRMMNCPKILRQLGSKVLLPLTYERINKSMNKSIHIVVTMAKS 69
           T +LFL +   AS    G+      +   LG  V LPL    ++  +   I I    A +
Sbjct: 34  TSLLFLLMGLRAS----GKDSAPTVVSGILGGSVTLPLNIS-VDTEIENVIWIGPKNALA 88

Query: 70  LENSVENKIVSLDPSEAGPPRYLGDRYKFYLENLTLGIRESRKE--DEGWYLMTLEKNVS 127
                EN  + +  S  G        Y   + NLTL    S K   ++  + +T E+  +
Sbjct: 89  FARPKENVTIMVK-SYLGRLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFT 147

Query: 128 VQRFCLQLRLYEQVSTPEIKVLN-KTQENGTCTLILGCTVEKGDH-VAYSWSEKAGTHPL 185
                  L +YEQ+  P++ + + K  EN +C + L C+V+  +  V YSW+ +      
Sbjct: 148 -------LFVYEQLQEPQVTMKSVKVSENFSCNITLMCSVKGAEKSVLYSWTPREPH--A 198

Query: 186 NPANSSHLLSLTLGPQHADNIYICTVSNPISNNS 219
           + +N   +L+++  P   D  YICT  NP+S  S
Sbjct: 199 SESNGGSILTVSRTPCDPDLPYICTAQNPVSQRS 232



 Score = 48.5 bits (114), Expect = 8e-06
 Identities = 55/227 (24%), Positives = 94/227 (41%), Gaps = 28/227 (12%)

Query: 39  LGSKVLLPLTY------ERINKSMNKSIHIVVTMAKSLENSVENKIVSLDPSEAGPPRYL 92
           LG  V LPL        E++    N SI   ++  +    + +  I S DP +       
Sbjct: 261 LGEPVTLPLALPACRDTEKVVWLFNTSI---ISKEREEAATADPLIKSRDPYK------- 310

Query: 93  GDRYKFYLENLTLGIRESRKEDEGWY--LMTLEKNVSVQRFCLQLRLYEQVSTPEIKVLN 150
            +R     ++ +L I + + ED G Y   +  E +       + L +Y ++  P+I    
Sbjct: 311 -NRVWVSSQDCSLKISQLKIEDAGPYHAYVCSEASSVTSMTHVTLLIYRRLRKPKITWSL 369

Query: 151 KTQENGTCTLILGCTVEKGDH-VAYSWSEKAGTHPLNPANSSHLLSLTLGPQHADNIYIC 209
           +  E+G C + L C+VE G + V Y+W+       ++   S   +S      H +    C
Sbjct: 370 RHSEDGICRISLTCSVEDGGNTVMYTWTPLQKEAVVSQGESHLNVSWRSSENHPN--LTC 427

Query: 210 TVSNPISNNSQTFSPWPGCRTDPSETKPWAVYAGLLGGVIMILIMVV 256
           T SNP+S +S  F     C      TK W      +G  +M+ ++ V
Sbjct: 428 TASNPVSRSSHQFLSENICSGPERNTKLW------IGLFLMVCLLCV 468


>gi|148612793 carcinoembryonic antigen-related cell adhesion
           molecule isoform 1 [Homo sapiens]
          Length = 293

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 20/175 (11%)

Query: 99  YLENLTLGIRESRKEDEGWY-LMTLEKNVSVQRFCLQLRLYEQVSTPEIKVLNKT-QENG 156
           + +N+TL       ED G+Y L    +N  +++    LR+YE V+ P I+  + T  E G
Sbjct: 108 HFQNVTL-------EDTGYYNLQVTYRNSQIEQASHHLRVYESVAQPSIQASSTTVTEKG 160

Query: 157 TCTLILGCTVEKGDHVAYSW----SEKAGTHPLNPANSSHLLSLTLGPQHADNIYICTVS 212
           +  ++L C        ++ W         T  +  +  +H+L++    Q     Y C VS
Sbjct: 161 S--VVLTCHTNNTG-TSFQWIFNNQRLQVTKRMKLSWFNHVLTIDPIRQEDAGEYQCEVS 217

Query: 213 NPISNNSQTFSPWPGCRTDPSETKPWAVYAGLLGGVIMILIMVVILQLRRRGKTN 267
           NP+S+N       P   T  S+     +  G+L G +++  +V  L LR+ G+ +
Sbjct: 218 NPVSSNRSD----PLKLTVKSDDNTLGILIGVLVGSLLVAALVCFLLLRKTGRAS 268


>gi|52317156 carcinoembryonic antigen-related cell adhesion molecule
           isoform 2 [Homo sapiens]
          Length = 292

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 31/180 (17%)

Query: 99  YLENLTLGIRESRKEDEGWY-LMTLEKNVSVQRFCLQLRLYEQVSTPEIKVLNKT-QENG 156
           + +N+TL       ED G+Y L    +N  +++    LR+YE V+ P I+  + T  E G
Sbjct: 108 HFQNVTL-------EDTGYYNLQVTYRNSQIEQASHHLRVYESVAQPSIQASSTTVTEKG 160

Query: 157 TCTLILGCTVEKGDHVAYSW----SEKAGTHPLNPANSSHLLSLTLGPQHADNIYICTVS 212
           +  ++L C        ++ W         T  +  +  +H+L++    Q     Y C VS
Sbjct: 161 S--VVLTCHTNNTG-TSFQWIFNNQRLQVTKRMKLSWFNHVLTIDPIRQEDAGEYQCEVS 217

Query: 213 NPISNNSQTFSPWPGCRTDPSE-----TKPWAVYAGLLGGVIMILIMVVILQLRRRGKTN 267
           NP+S+N          R+DP +          +  G+L G +++  +V  L LR+ G+ +
Sbjct: 218 NPVSSN----------RSDPLKLTVKYDNTLGILIGVLVGSLLVAALVCFLLLRKTGRAS 267


>gi|121674801 hepatocyte cell adhesion molecule [Homo sapiens]
          Length = 416

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 22/214 (10%)

Query: 94  DRYKFYLENLTLGIRESRKEDEGWYLMTLEKNVSVQRFC----LQLRLYEQVSTPEIKVL 149
           DR + + EN +L + + +  DEG Y   +E +++   F     + L +   +S P++ V 
Sbjct: 97  DRIRLF-ENGSLLLSDLQLADEGTY--EVEISITDDTFTGEKTINLTVDVPISRPQVLVA 153

Query: 150 NKTQENGTCTLILGCTVEKGDHVAYSWSEKAGTHPLNPAN-----SSHLLSLTLGPQHAD 204
           + T    +    L C+ E G   +Y+W  K G   LN +         +L++T      D
Sbjct: 154 STTVLELSEAFTLNCSHENGTKPSYTWL-KDGKPLLNDSRMLLSPDQKVLTITRVLMEDD 212

Query: 205 NIYICTVSNPISNNSQTFSPWPGCRTDPSETKPWAVYAGLLGGVIMILIMVVILQLRRRG 264
           ++Y C V NPIS         P   T    +  + + +   GG+ +++ +V +    +  
Sbjct: 213 DLYSCMVENPISQGRSL----PVKITVYRRSSLYIILS--TGGIFLLVTLVTVCACWKPS 266

Query: 265 KTNHYQTTVEKKSLTIYAQVQKPGPLQKKLDSFP 298
           K    Q  +EK++   Y   Q    L+ + D+ P
Sbjct: 267 KRK--QKKLEKQNSLEYMD-QNDDRLKPEADTLP 297


>gi|7657570 sialic acid binding Ig-like lectin 7 isoform 1 [Homo
           sapiens]
          Length = 467

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 7/120 (5%)

Query: 101 ENLTLGIRESRKEDEGWYLMTLEK-NVSVQRFCLQLRLYEQVSTPEIKVLNKTQENGTCT 159
           +N TL IR++R  D G Y   +EK N+       QL +     T    +L        C 
Sbjct: 104 KNCTLSIRDARMSDAGRYFFRMEKGNIKWNYKYDQLSVNVTALTHRPNILIPGTLESGCF 163

Query: 160 LILGCTV----EKGDHVAYSWSEKAGTHPLNPANS-SHLLSLTLGPQHADNIYICTVSNP 214
             L C+V    E+G     SW       PL+P+ + S +L+L   PQH      C V+ P
Sbjct: 164 QNLTCSVPWACEQGTPPMISWM-GTSVSPLHPSTTRSSVLTLIPQPQHHGTSLTCQVTLP 222


>gi|5360210 poliovirus receptor related 2 isoform alpha precursor
           [Homo sapiens]
          Length = 479

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 12/121 (9%)

Query: 156 GTCTLILGCTVEKG-DHVAYSWSEKAGTHPLNPANSSHLLSLTLGPQHADNIYICTVSNP 214
           G     L C V    +   Y WS  +GT P +       L +       +  ++CTV+N 
Sbjct: 275 GRTDATLSCDVRSNPEPTGYDWSTTSGTFPTSAVAQGSQLVIHAVDSLFNTTFVCTVTNA 334

Query: 215 I--SNNSQTFSPWPGCRTDPSETKPWAVYAGLLGGVIMILIMV-------VILQLRRRGK 265
           +      Q        R  P +  P  +  G +GG +++L+++       ++L++RRR K
Sbjct: 335 VGMGRAEQVIFVRETPRASPRDVGP--LVWGAVGGTLLVLLLLAGGSLAFILLRVRRRRK 392

Query: 266 T 266
           +
Sbjct: 393 S 393


>gi|205830473 sialic acid binding Ig-like lectin 11 isoform 2 [Homo
           sapiens]
          Length = 602

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 10/117 (8%)

Query: 104 TLGIRESRKEDEGWYLMTLEKNVSVQRFCLQLRLYEQVST----PEIKVLNKTQENG--- 156
           +L IR++++EDE WY   +E+   V+   L    + +V+     P++  + +T E G   
Sbjct: 115 SLVIRDAQREDEAWYFFRVERGSRVRHSFLSNAFFLKVTALTKKPDV-YIPETLEPGQPV 173

Query: 157 TCTLILGCTVEKGDHVAYSWSEKAGTHPLNPANSSH--LLSLTLGPQHADNIYICTV 211
           T   +     +K    ++SW+  A +      ++SH  +LS T  PQ  D    C V
Sbjct: 174 TVICVFNWAFKKCPAPSFSWTGAALSPRRTRPSTSHFSVLSFTPSPQDHDTDLTCHV 230


>gi|205830470 sialic acid binding Ig-like lectin 11 isoform 1 [Homo
           sapiens]
          Length = 698

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 10/117 (8%)

Query: 104 TLGIRESRKEDEGWYLMTLEKNVSVQRFCLQLRLYEQVST----PEIKVLNKTQENG--- 156
           +L IR++++EDE WY   +E+   V+   L    + +V+     P++  + +T E G   
Sbjct: 115 SLVIRDAQREDEAWYFFRVERGSRVRHSFLSNAFFLKVTALTKKPDV-YIPETLEPGQPV 173

Query: 157 TCTLILGCTVEKGDHVAYSWSEKAGTHPLNPANSSH--LLSLTLGPQHADNIYICTV 211
           T   +     +K    ++SW+  A +      ++SH  +LS T  PQ  D    C V
Sbjct: 174 TVICVFNWAFKKCPAPSFSWTGAALSPRRTRPSTSHFSVLSFTPSPQDHDTDLTCHV 230


>gi|23943856 sialic acid binding Ig-like lectin 9 [Homo sapiens]
          Length = 463

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 11/124 (8%)

Query: 99  YLENLTLGIRESRKEDEGWYLMTLEKNV---SVQRFCLQLRLYEQVSTPEIKVLNKTQ-- 153
           + +N TL IR++R+ D G Y   +EK     + +   L + +      P I +    +  
Sbjct: 98  HTKNCTLSIRDARRSDAGRYFFRMEKGSIKWNYKHHRLSVNVTALTHRPNILIPGTLESG 157

Query: 154 --ENGTCTLILGCTVEKGDHVAYSWSEKAGTHPLNPANS-SHLLSLTLGPQHADNIYICT 210
             +N TC++   C  E+G     SW       PL+P+ + S +L+L   PQ       C 
Sbjct: 158 CPQNLTCSVPWAC--EQGTPPMISWI-GTSVSPLDPSTTRSSVLTLIPQPQDHGTSLTCQ 214

Query: 211 VSNP 214
           V+ P
Sbjct: 215 VTFP 218


>gi|94538343 sialic acid binding Ig-like lectin 8 [Homo sapiens]
          Length = 499

 Score = 37.0 bits (84), Expect = 0.025
 Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 18/136 (13%)

Query: 92  LGDRYKFYLENLTLGIRESRKEDEGWYLMTLEKNVSVQRFCLQLRL-YEQVST------- 143
           LGD    +  + +L IR++RK D+G Y   LE+      +  QL    +Q+S        
Sbjct: 99  LGD---IWSNDCSLSIRDARKRDKGSYFFRLERGSMKWSYKSQLNYKTKQLSVFVTALTH 155

Query: 144 -PEIKVLNKTQ----ENGTCTLILGCTVEKGDHVAYSWSEKAGTHPLNPANSSHLLSLTL 198
            P+I +L   +     N TC++   C  ++G     SW   + + P      S +L+LT 
Sbjct: 156 RPDILILGTLESGHSRNLTCSVPWAC--KQGTPPMISWIGASVSSPGPTTARSSVLTLTP 213

Query: 199 GPQHADNIYICTVSNP 214
            PQ       C V+ P
Sbjct: 214 KPQDHGTSLTCQVTLP 229


>gi|68161541 carcinoembryonic antigen-related cell adhesion molecule
           1 isoform 2 precursor [Homo sapiens]
          Length = 464

 Score = 35.8 bits (81), Expect = 0.055
 Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 6/122 (4%)

Query: 102 NLTLGIRESRKEDEGWYLMTLEKNVSVQRFCL-QLRLYEQVSTPEIKVLNKTQENGTCTL 160
           N +L I+   + D G+Y + + K+  V      Q  +Y ++  P I   N         +
Sbjct: 104 NASLLIQNVTQNDTGFYTLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDKDAV 163

Query: 161 ILGCTVEKGDHVAYSWSEKAGTHPLNP----ANSSHLLSLTLGPQHADNIYICTVSNPIS 216
              C  E  D   Y W     + P++P    +N +  L+L    ++    Y C + NP+S
Sbjct: 164 AFTCEPETQD-TTYLWWINNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVS 222

Query: 217 NN 218
            N
Sbjct: 223 AN 224


>gi|19923195 carcinoembryonic antigen-related cell adhesion molecule
           1 isoform 1 precursor [Homo sapiens]
          Length = 526

 Score = 35.8 bits (81), Expect = 0.055
 Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 6/122 (4%)

Query: 102 NLTLGIRESRKEDEGWYLMTLEKNVSVQRFCL-QLRLYEQVSTPEIKVLNKTQENGTCTL 160
           N +L I+   + D G+Y + + K+  V      Q  +Y ++  P I   N         +
Sbjct: 104 NASLLIQNVTQNDTGFYTLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDKDAV 163

Query: 161 ILGCTVEKGDHVAYSWSEKAGTHPLNP----ANSSHLLSLTLGPQHADNIYICTVSNPIS 216
              C  E  D   Y W     + P++P    +N +  L+L    ++    Y C + NP+S
Sbjct: 164 AFTCEPETQD-TTYLWWINNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVS 222

Query: 217 NN 218
            N
Sbjct: 223 AN 224



 Score = 30.0 bits (66), Expect = 3.0
 Identities = 47/209 (22%), Positives = 82/209 (39%), Gaps = 29/209 (13%)

Query: 141 VSTPEIKVLNKTQENGTCTLILGCTVEKGDHVAYSWSEKAGTHP----LNPANSSHLLSL 196
           V+ P+IK    T      ++ L C+      ++  W  K  + P    +  +  +  LS+
Sbjct: 325 VAKPQIKASKTTVTGDKDSVNLTCSTNDTG-ISIRWFFKNQSLPSSERMKLSQGNTTLSI 383

Query: 197 TLGPQHADNIYICTVSNPIS-NNSQTFSPWPGCRTDPSET--KPWAVYAGLLGGVIMILI 253
               +     Y C V NPIS N S            P E    P A+ AG++ GV+ ++ 
Sbjct: 384 NPVKREDAGTYWCEVFNPISKNQSDPIMLNVNYNALPQENGLSPGAI-AGIVIGVVALVA 442

Query: 254 MVVI-----LQLRRRGKTNHYQTTVE-KKSLTIYAQVQKPGPLQKKLD------SFPAQD 301
           ++ +     L   + G+ +  +   E K S++ + Q     P  K  +      +F AQ 
Sbjct: 443 LIAVALACFLHFGKTGRASDQRDLTEHKPSVSNHTQDHSNDPPNKMNEVTYSTLNFEAQQ 502

Query: 302 PCTTIYVAATEPVPESVQETNSITVYASV 330
           P        T+P   S   T +  +Y+ V
Sbjct: 503 P--------TQPTSASPSLTATEIIYSEV 523


>gi|193794821 sialic acid binding Ig-like lectin 6 isoform 1
           precursor [Homo sapiens]
          Length = 453

 Score = 35.0 bits (79), Expect = 0.094
 Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 9/121 (7%)

Query: 101 ENLTLGIRESRKEDEGWYLMTLEKNVSVQRFC---LQLRLYEQVSTPEIKVLNKTQE--- 154
           +N +L IR++R+ D   Y   L+       +    L +R+      P I +    +    
Sbjct: 102 KNCSLSIRDARRRDNAAYFFRLKSKWMKYGYTSSKLSVRVMALTHRPNISIPGTLESGHP 161

Query: 155 -NGTCTLILGCTVEKGDHVAYSWSEKAGTHPLNPANSSHLLSLTLGPQHADNIYICTVSN 213
            N TC++   C  E+G    +SW   A T        S +L++T  PQ       C V+ 
Sbjct: 162 SNLTCSVPWVC--EQGTPPIFSWMSAAPTSLGPRTTQSSVLTITPRPQDHSTNLTCQVTF 219

Query: 214 P 214
           P
Sbjct: 220 P 220


>gi|193794819 sialic acid binding Ig-like lectin 6 isoform 2
           precursor [Homo sapiens]
          Length = 437

 Score = 35.0 bits (79), Expect = 0.094
 Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 9/121 (7%)

Query: 101 ENLTLGIRESRKEDEGWYLMTLEKNVSVQRFC---LQLRLYEQVSTPEIKVLNKTQE--- 154
           +N +L IR++R+ D   Y   L+       +    L +R+      P I +    +    
Sbjct: 102 KNCSLSIRDARRRDNAAYFFRLKSKWMKYGYTSSKLSVRVMALTHRPNISIPGTLESGHP 161

Query: 155 -NGTCTLILGCTVEKGDHVAYSWSEKAGTHPLNPANSSHLLSLTLGPQHADNIYICTVSN 213
            N TC++   C  E+G    +SW   A T        S +L++T  PQ       C V+ 
Sbjct: 162 SNLTCSVPWVC--EQGTPPIFSWMSAAPTSLGPRTTQSSVLTITPRPQDHSTNLTCQVTF 219

Query: 214 P 214
           P
Sbjct: 220 P 220


>gi|193794817 sialic acid binding Ig-like lectin 6 isoform 3
           precursor [Homo sapiens]
          Length = 353

 Score = 35.0 bits (79), Expect = 0.094
 Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 9/121 (7%)

Query: 101 ENLTLGIRESRKEDEGWYLMTLEKNVSVQRFC---LQLRLYEQVSTPEIKVLNKTQE--- 154
           +N +L IR++R+ D   Y   L+       +    L +R+      P I +    +    
Sbjct: 102 KNCSLSIRDARRRDNAAYFFRLKSKWMKYGYTSSKLSVRVMALTHRPNISIPGTLESGHP 161

Query: 155 -NGTCTLILGCTVEKGDHVAYSWSEKAGTHPLNPANSSHLLSLTLGPQHADNIYICTVSN 213
            N TC++   C  E+G    +SW   A T        S +L++T  PQ       C V+ 
Sbjct: 162 SNLTCSVPWVC--EQGTPPIFSWMSAAPTSLGPRTTQSSVLTITPRPQDHSTNLTCQVTF 219

Query: 214 P 214
           P
Sbjct: 220 P 220


>gi|37700249 HEPACAM family member 2 isoform 2 [Homo sapiens]
          Length = 450

 Score = 35.0 bits (79), Expect = 0.094
 Identities = 55/226 (24%), Positives = 93/226 (41%), Gaps = 37/226 (16%)

Query: 11  FVLFLSLAFGASYGTGGRMMNCPK--ILRQLGSKVLLPLTYERINKSMNKSIHIVV---- 64
           F  FLS A GA     G  +  P   +    G  + LP+ Y     + +  I  +     
Sbjct: 6   FTTFLSFATGAC---SGLKVTVPSHTVHGVRGQALYLPVHYGFHTPASDIQIIWLFERPH 62

Query: 65  TMAKSLENSVENKIVSLDPSEAGPPRYLGDRYKFYLENLTLGIRESRKEDEGWYLM--TL 122
           TM K L  SV   +V        P      ++     N +L I   +  DEG Y++   +
Sbjct: 63  TMPKYLLGSVNKSVV--------PDLEYQHKFTMMPPNASLLINPLQFPDEGNYIVKVNI 114

Query: 123 EKNVSVQRFC-LQLRLYEQVSTPEIKV---LNKTQENGTCTLILGCTVEKGDHVAYSWSE 178
           + N ++     +Q+ + + V+ P +++       +  G  TL   C VE G  +AY W +
Sbjct: 115 QGNGTLSASQKIQVTVDDPVTKPVVQIHPPSGAVEYVGNMTLT--CHVEGGTRLAYQWLK 172

Query: 179 K------AGTHPLNPANSSHLLSLTLGPQHADNI--YICTVSNPIS 216
                  + T+  +P N+    +L + P   ++I  Y C V NP+S
Sbjct: 173 NGRPVHTSSTYSFSPQNN----TLHIAPVTKEDIGNYSCLVRNPVS 214


>gi|42560237 poliovirus receptor-related 1 isoform 1 [Homo sapiens]
          Length = 517

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 14/106 (13%)

Query: 174 YSWSEKAGTHPLNPANSSHLLSLTLGPQHAD--NIYICTVSNPISNNSQ---------TF 222
           Y W+   G+ P      +  L    GP +      YIC  +NPI   S           +
Sbjct: 280 YHWTTLNGSLPKGVEAQNRTLFFK-GPINYSLAGTYICEATNPIGTRSGQVEVNITEFPY 338

Query: 223 SPWPGCRTDPSETKPWAVYAGLLGGVIMILIMV--VILQLRRRGKT 266
           +P P      +   P A+  G+ G ++++LI+V  +++ LRRR  T
Sbjct: 339 TPSPPEHGRRAGPVPTAIIGGVAGSILLVLIVVGGIVVALRRRRHT 384


>gi|86439957 HEPACAM family member 2 isoform 1 [Homo sapiens]
          Length = 462

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 28/166 (16%)

Query: 65  TMAKSLENSVENKIVSLDPSEAGPPRYLGDRYKFYLENLTLGIRESRKEDEGWYLM--TL 122
           TM K L  SV   +V        P      ++     N +L I   +  DEG Y++   +
Sbjct: 75  TMPKYLLGSVNKSVV--------PDLEYQHKFTMMPPNASLLINPLQFPDEGNYIVKVNI 126

Query: 123 EKNVSVQRFC-LQLRLYEQVSTPEIKV---LNKTQENGTCTLILGCTVEKGDHVAYSWSE 178
           + N ++     +Q+ + + V+ P +++       +  G  TL   C VE G  +AY W +
Sbjct: 127 QGNGTLSASQKIQVTVDDPVTKPVVQIHPPSGAVEYVGNMTLT--CHVEGGTRLAYQWLK 184

Query: 179 K------AGTHPLNPANSSHLLSLTLGPQHADNI--YICTVSNPIS 216
                  + T+  +P N+    +L + P   ++I  Y C V NP+S
Sbjct: 185 NGRPVHTSSTYSFSPQNN----TLHIAPVTKEDIGNYSCLVRNPVS 226


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 37/153 (24%), Positives = 56/153 (36%), Gaps = 16/153 (10%)

Query: 85   EAGPPRYLGDR-------YKFYLEN--LTLGIRESRKEDEGWYLMTLEKNVSVQRFCLQL 135
            E G   Y GD        YK +  N   TL   +    D G Y+   E +V        L
Sbjct: 7989 EIGVSWYKGDTKLRPTTTYKMHFRNNVATLVFNQVDINDSGEYICKAENSVGEVSASTFL 8048

Query: 136  RLYEQVSTPEI-KVLNKTQENGTCTLILGCTVEKGDHVAYSWSEKAGTHPLNPANSSHLL 194
             + EQ   P   + L   QE     ++  C +   + ++ SW +       +P   +  L
Sbjct: 8049 TVQEQKLPPSFSRQLRDVQETVGLPVVFDCAISGSEPISVSWYKDGKPLKDSPNVQTSFL 8108

Query: 195  --SLTLGPQHADNI----YICTVSNPISNNSQT 221
              + TL     D      Y CT +NPI + S +
Sbjct: 8109 DNTATLNIFKTDRSLAGQYSCTATNPIGSASSS 8141


>gi|38490688 immunoglobulin superfamily, member 10 [Homo sapiens]
          Length = 2623

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 35/147 (23%), Positives = 62/147 (42%), Gaps = 11/147 (7%)

Query: 82   DPSEAGPPRYLGDRYKFYLENLTLGIRESRKEDEGWYLMTLEKNVSVQRFCLQLRLYEQV 141
            D +E  P ++   +  F   N TL IR     D G Y      +   +R  + L + E+V
Sbjct: 1880 DGTEVKPLQFTNSKL-FLFSNGTLYIRNLASSDRGTYECIATSSTGSERRVVMLTMEERV 1938

Query: 142  STPEIKVLN--KTQENGTCTLILGC--TVEKGDHVAYSWSEKAGTHPLNPANS-SHLL-- 194
            ++P I+  +  +T+ N    L+L C  T E    + +    KA     +   S  H+   
Sbjct: 1939 TSPRIEAASQKRTEVNFGDKLLLNCSATGEPKPQIMWRLPSKAVVDQQHRVGSWIHVYPN 1998

Query: 195  -SLTLG--PQHADNIYICTVSNPISNN 218
             SL +G   +    +Y+C   N + ++
Sbjct: 1999 GSLFIGSVTEKDSGVYLCVARNKMGDD 2025


>gi|157805480 pregnancy specific beta-1-glycoprotein 7 precursor
           [Homo sapiens]
          Length = 419

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 39/152 (25%), Positives = 58/152 (38%), Gaps = 20/152 (13%)

Query: 74  VENKIVSLDPSEAGPPRYLGDRYKFYLENLTLGIRESRKEDEGWYLMTLEKNVS-----V 128
           V+ +I+   P+ +G       R   Y  N +L I+   +ED G Y + + K         
Sbjct: 84  VDGQIIKYGPAYSG-------RETVY-SNASLLIQNVTQEDTGSYTLHIIKRGDGTGGVT 135

Query: 129 QRFCLQLRLYEQVSTPEIKVLNKTQENGTCTLILGCTVEKGDHVAYSW----SEKAGTHP 184
            RF   L  Y +   P I   N      T  +IL C  E  D  +Y W         TH 
Sbjct: 136 GRFTFTL--YLETPKPSISSSNFNPREATEAVILTCDPETPD-ASYLWWMNGQSLPMTHS 192

Query: 185 LNPANSSHLLSLTLGPQHADNIYICTVSNPIS 216
           L  + ++  L L     +    Y C + NP+S
Sbjct: 193 LQLSETNRTLYLFGVTNYTAGPYECEIRNPVS 224


>gi|112789532 poliovirus receptor related 2 isoform delta precursor
           [Homo sapiens]
          Length = 538

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 10/152 (6%)

Query: 156 GTCTLILGCTVEKG-DHVAYSWSEKAGTHPLNPANSSHLLSLTLGPQHADNIYICTVSNP 214
           G     L C V    +   Y WS  +GT P +       L +       +  ++CTV+N 
Sbjct: 275 GRTDATLSCDVRSNPEPTGYDWSTTSGTFPTSAVAQGSQLVIHAVDSLFNTTFVCTVTNA 334

Query: 215 ISNNSQTFSPWPGCRTDPSETKPWAVYAGLLGGVIMILIMVV-----ILQLRRRGKTNHY 269
           +         +   R  P+     A   G++GG+I  +I        IL  R++ K    
Sbjct: 335 VGMGRAEQVIF--VRETPNTAGAGAT-GGIIGGIIAAIIATAVAATGILICRQQRKEQTL 391

Query: 270 QTTVEKKSLTIYAQVQKPGPLQK-KLDSFPAQ 300
           Q   E + L      + P P  K +    P+Q
Sbjct: 392 QGAEEDEDLEGPPSYKPPTPKAKLEAQEMPSQ 423


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.133    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,305,869
Number of Sequences: 37866
Number of extensions: 591877
Number of successful extensions: 1725
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 1664
Number of HSP's gapped (non-prelim): 115
length of query: 335
length of database: 18,247,518
effective HSP length: 103
effective length of query: 232
effective length of database: 14,347,320
effective search space: 3328578240
effective search space used: 3328578240
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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