Guide to the Human Genome
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Name: HEPACAM2 Sequence: fasta or formatted (450aa) NCBI GI: 37700249
Description:

HEPACAM family member 2 isoform 2

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [462aa] HEPACAM family member 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         21           1
 C cysteine            1.8          8           2
 D aspartate           4.7         21           2
 E glutamate           4.7         21           1
 F phenylalanine       3.8         17           1
 G glycine             6.7         30           2
 H histidine           3.8         17           1
 I isoleucine          6.7         30           2
 K lysine              5.3         24           2
 L leucine             7.8         35           2
 M methionine          2.0          9           2
 N asparagine          3.8         17           2
 P proline             6.9         31           2
 Q glutamine           4.9         22           3
 R arginine            2.9         13           2
 S serine              8.0         36           2
 T threonine           7.1         32           2
 V valine              8.9         40           2
 W tryptophan          1.1          5           1
 Y tyrosine            4.7         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   HEPACAM family member 2 isoform 2 
HEPACAM2              0.968   HEPACAM family member 2 isoform 1 
HEPACAM               0.092   hepatocyte cell adhesion molecule 
CEACAM8               0.063   carcinoembryonic antigen-related cell adhesion molec...
CEACAM6               0.063   carcinoembryonic antigen-related cell adhesion molec...
PSG2                  0.060   pregnancy specific beta-1-glycoprotein 2 
PSG4                  0.057   pregnancy specific beta-1-glycoprotein 4 isoform 2 [...
PSG11                 0.056   pregnancy specific beta-1-glycoprotein 11 isoform 1...
CEACAM1               0.054   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.054   carcinoembryonic antigen-related cell adhesion molec...
CEACAM5               0.048   carcinoembryonic antigen-related cell adhesion molec...
HMCN1                 0.048   hemicentin 1 
FSTL4                 0.047   follistatin-like 4 
CEACAM20              0.046   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.046   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.046   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.046   carcinoembryonic antigen-related cell adhesion mole...
HMCN2                 0.044   PREDICTED: hemicentin 2 
HMCN2                 0.044   PREDICTED: hemicentin 2 
HMCN2                 0.044   PREDICTED: hemicentin 2 
PSG5                  0.044   pregnancy specific beta-1-glycoprotein 5 
PSG5                  0.044   pregnancy specific beta-1-glycoprotein 5 
TTN                   0.043   titin isoform N2-A 
CEACAM21              0.043   carcinoembryonic antigen-related cell adhesion molec...
CEACAM21              0.042   carcinoembryonic antigen-related cell adhesion mole...
CEACAM16              0.042   carcinoembryonic antigen-related cell adhesion molec...
PSG1                  0.040   pregnancy specific beta-1-glycoprotein 1 
PSG6                  0.039   pregnancy specific beta-1-glycoprotein 6 isoform a [H...
PSG6                  0.039   pregnancy specific beta-1-glycoprotein 6 isoform b [...
PSG11                 0.039   pregnancy specific beta-1-glycoprotein 11 isoform 2...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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