Guide to the Human Genome
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Name: HEPACAM2 Sequence: fasta or formatted (462aa) NCBI GI: 86439957
Description:

HEPACAM family member 2 isoform 1

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [450aa] HEPACAM family member 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         21           1
 C cysteine            1.9          9           2
 D aspartate           5.0         23           2
 E glutamate           4.8         22           1
 F phenylalanine       3.9         18           1
 G glycine             7.1         33           2
 H histidine           3.7         17           1
 I isoleucine          6.7         31           2
 K lysine              5.2         24           2
 L leucine             8.0         37           3
 M methionine          2.2         10           2
 N asparagine          3.7         17           2
 P proline             6.9         32           2
 Q glutamine           5.2         24           3
 R arginine            2.8         13           2
 S serine              7.6         35           2
 T threonine           6.5         30           2
 V valine              8.7         40           2
 W tryptophan          0.9          4           1
 Y tyrosine            4.8         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   HEPACAM family member 2 isoform 1 
HEPACAM2              0.942   HEPACAM family member 2 isoform 2 
HEPACAM               0.089   hepatocyte cell adhesion molecule 
CEACAM8               0.062   carcinoembryonic antigen-related cell adhesion molec...
CEACAM6               0.062   carcinoembryonic antigen-related cell adhesion molec...
PSG2                  0.058   pregnancy specific beta-1-glycoprotein 2 
PSG4                  0.055   pregnancy specific beta-1-glycoprotein 4 isoform 2 [...
PSG11                 0.054   pregnancy specific beta-1-glycoprotein 11 isoform 1...
CEACAM1               0.053   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.053   carcinoembryonic antigen-related cell adhesion molec...
CEACAM5               0.046   carcinoembryonic antigen-related cell adhesion molec...
HMCN1                 0.046   hemicentin 1 
FSTL4                 0.045   follistatin-like 4 
CEACAM20              0.044   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.044   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.044   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.044   carcinoembryonic antigen-related cell adhesion mole...
HMCN2                 0.043   PREDICTED: hemicentin 2 
HMCN2                 0.043   PREDICTED: hemicentin 2 
HMCN2                 0.043   PREDICTED: hemicentin 2 
PSG5                  0.043   pregnancy specific beta-1-glycoprotein 5 
PSG5                  0.043   pregnancy specific beta-1-glycoprotein 5 
TTN                   0.042   titin isoform N2-A 
CEACAM21              0.042   carcinoembryonic antigen-related cell adhesion molec...
CEACAM21              0.041   carcinoembryonic antigen-related cell adhesion mole...
PSG1                  0.039   pregnancy specific beta-1-glycoprotein 1 
PSG6                  0.038   pregnancy specific beta-1-glycoprotein 6 isoform a [H...
PSG6                  0.038   pregnancy specific beta-1-glycoprotein 6 isoform b [...
PSG11                 0.038   pregnancy specific beta-1-glycoprotein 11 isoform 2...
PSG11                 0.038   pregnancy specific beta-1-glycoprotein 11 isoform 2...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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