| Name: OPCML | Sequence: fasta or formatted (345aa) | NCBI GI: 4505505 | |
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Description: opioid binding protein/cell adhesion molecule-like isoform a preproprotein
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Referenced in:
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Other entries for this name:
alt prot [338aa] opioid binding protein/cell adhesion molecule-like isoform b prep... | |||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 6.1 21 2 C cysteine 2.6 9 1 D aspartate 5.2 18 2 E glutamate 4.6 16 2 F phenylalanine 3.2 11 2 G glycine 7.0 24 1 H histidine 1.2 4 1 I isoleucine 6.1 21 2 K lysine 4.6 16 1 L leucine 8.4 29 2 M methionine 2.0 7 1 N asparagine 5.2 18 1 P proline 4.9 17 2 Q glutamine 2.9 10 1 R arginine 4.9 17 1 S serine 7.8 27 2 T threonine 7.8 27 1 V valine 10.1 35 3 W tryptophan 1.7 6 1 Y tyrosine 3.5 12 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 opioid binding protein/cell adhesion molecule-like is... OPCML 0.920 opioid binding protein/cell adhesion molecule-like i... NTM 0.774 neurotrimin isoform 1 NTM 0.763 neurotrimin isoform 3 NTM 0.733 neurotrimin isoform 4 NTM 0.691 neurotrimin isoform 2 LSAMP 0.509 limbic system-associated membrane protein NEGR1 0.438 neuronal growth regulator 1 IGLON5 0.427 IgLON family member 5 IGSF9B 0.123 immunoglobulin superfamily, member 9B PXDN 0.111 peroxidasin HMCN1 0.111 hemicentin 1 LOC100292387 0.108 PREDICTED: similar to hemicentin 2 HMCN2 0.108 PREDICTED: hemicentin 2 LOC100289200 0.108 PREDICTED: hypothetical protein XP_002342997 TTN 0.107 titin isoform N2-A PXDNL 0.105 peroxidasin homolog-like HSPG2 0.105 heparan sulfate proteoglycan 2 NCAM1 0.101 neural cell adhesion molecule 1 isoform 1 NCAM1 0.101 neural cell adhesion molecule 1 isoform 3 HMCN2 0.099 PREDICTED: hemicentin 2 HMCN2 0.099 PREDICTED: hemicentin 2 NCAM2 0.099 neural cell adhesion molecule 2 precursor NCAM1 0.099 neural cell adhesion molecule 1 isoform 2 IGSF9 0.092 immunoglobulin superfamily, member 9 isoform a [Hom... CADM2 0.092 immunoglobulin superfamily, member 4D IGSF9 0.092 immunoglobulin superfamily, member 9 isoform b [Hom... CNTN5 0.091 contactin 5 isoform long CNTN5 0.091 contactin 5 isoform short ROBO2 0.089 roundabout, axon guidance receptor, homolog 2 isofo...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
