Name: PXDN | Sequence: fasta or formatted (1479aa) | NCBI GI: 109150416 | |
Description: peroxidasin
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Referenced in: Leucine-rich Repeat Family
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 6.6 97 3 C cysteine 3.1 46 2 D aspartate 5.1 75 2 E glutamate 5.5 82 2 F phenylalanine 4.0 59 2 G glycine 6.4 95 2 H histidine 3.1 46 1 I isoleucine 5.1 75 2 K lysine 3.0 45 2 L leucine 9.6 142 3 M methionine 1.6 24 1 N asparagine 5.4 80 3 P proline 6.2 92 3 Q glutamine 4.8 71 1 R arginine 7.2 106 2 S serine 6.5 96 2 T threonine 6.9 102 2 V valine 6.4 94 2 W tryptophan 0.9 14 1 Y tyrosine 2.6 38 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 peroxidasin PXDNL 0.596 peroxidasin homolog-like TPO 0.171 thyroid peroxidase isoform a TPO 0.171 thyroid peroxidase isoform d EPX 0.164 eosinophil peroxidase MPO 0.161 myeloperoxidase LPO 0.142 lactoperoxidase isoform 1 preproprotein LPO 0.141 lactoperoxidase isoform 3 preproprotein TPO 0.139 thyroid peroxidase isoform b TPO 0.077 thyroid peroxidase isoform e LRIG1 0.067 leucine-rich repeats and immunoglobulin-like domains... LRIG3 0.065 leucine-rich repeats and immunoglobulin-like domains... LRIG3 0.065 leucine-rich repeats and immunoglobulin-like domain... ROBO1 0.060 roundabout 1 isoform b ROBO2 0.060 roundabout, axon guidance receptor, homolog 2 isofo... ROBO2 0.060 roundabout, axon guidance receptor, homolog 2 isofor... ROBO1 0.060 roundabout 1 isoform a LRIG2 0.059 leucine-rich repeats and immunoglobulin-like domains ... ROBO1 0.058 roundabout 1 isoform d ROBO1 0.058 roundabout 1 isoform c LOC642132 0.058 PREDICTED: similar to roundabout 1 isoform 1 LOC642132 0.058 PREDICTED: similar to roundabout 1 isoform 2 HMCN1 0.058 hemicentin 1 ROBO3 0.058 roundabout, axon guidance receptor, homolog 3 LOC100292387 0.056 PREDICTED: similar to hemicentin 2 HMCN2 0.054 PREDICTED: hemicentin 2 HMCN2 0.054 PREDICTED: hemicentin 2 HMCN2 0.054 PREDICTED: hemicentin 2 DCC 0.050 deleted in colorectal carcinoma MXRA5 0.049 adlicanHuman BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.