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Name: ROBO2 Sequence: fasta or formatted (1394aa) NCBI GI: 193083163
Description:

roundabout, axon guidance receptor, homolog 2 isoform ROBO2a

Referenced in:

Neurons

Other entries for this name:
alt prot [1378aa] roundabout, axon guidance receptor, homolog 2 isoform ROBO2b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         82           2
 C cysteine            1.0         14           1
 D aspartate           6.0         83           3
 E glutamate           5.1         71           3
 F phenylalanine       2.4         33           2
 G glycine             7.7        107           2
 H histidine           1.5         21           1
 I isoleucine          4.7         65           3
 K lysine              4.4         62           4
 L leucine             6.8         95           2
 M methionine          1.8         25           2
 N asparagine          4.2         59           3
 P proline             8.8        122           4
 Q glutamine           6.0         84           2
 R arginine            6.0         83           2
 S serine              8.6        120           3
 T threonine           7.9        110           2
 V valine              7.0         98           3
 W tryptophan          1.7         24           1
 Y tyrosine            2.6         36           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   roundabout, axon guidance receptor, homolog 2 isofo... 
ROBO2                 0.972   roundabout, axon guidance receptor, homolog 2 isofor...
ROBO1                 0.487   roundabout 1 isoform b 
ROBO1                 0.487   roundabout 1 isoform a 
ROBO1                 0.486   roundabout 1 isoform c 
LOC642132             0.486   PREDICTED: similar to roundabout 1 isoform 2 
ROBO1                 0.483   roundabout 1 isoform d 
LOC642132             0.483   PREDICTED: similar to roundabout 1 isoform 1 
ROBO3                 0.360   roundabout, axon guidance receptor, homolog 3 
NEO1                  0.075   neogenin homolog 1 
DSCAML1               0.073   Down syndrome cell adhesion molecule like 1 
DSCAM                 0.072   Down syndrome cell adhesion molecule isoform CHD2-42...
SDK1                  0.069   sidekick 1 
SDK2                  0.068   sidekick 2 
HMCN1                 0.067   hemicentin 1 
CNTN3                 0.066   contactin 3 
NRCAM                 0.065   neuronal cell adhesion molecule isoform A precursor ...
CNTN4                 0.065   contactin 4 isoform a precursor 
DCC                   0.065   deleted in colorectal carcinoma 
PXDN                  0.064   peroxidasin 
PTPRS                 0.064   protein tyrosine phosphatase, receptor type, sigma ...
HMCN2                 0.064   PREDICTED: hemicentin 2 
HMCN2                 0.064   PREDICTED: hemicentin 2 
HMCN2                 0.064   PREDICTED: hemicentin 2 
PTPRS                 0.064   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.064   protein tyrosine phosphatase, receptor type, sigma ...
CNTN2                 0.063   contactin 2 precursor 
PTPRD                 0.063   protein tyrosine phosphatase, receptor type, D isofo...
L1CAM                 0.062   L1 cell adhesion molecule isoform 3 precursor [Homo...
L1CAM                 0.062   L1 cell adhesion molecule isoform 2 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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