CNTN5 24730

Name: CNTN5	Sequence: fasta or formatted (1026aa)		NCBI GI: 28373129
Description: contactin 5 isoform short		Referenced in: Neurons
Other entries for this name: alt prot [1100aa] contactin 5 isoform long
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 67 2 C cysteine 1.4 14 1 D aspartate 3.7 38 2 E glutamate 7.5 77 3 F phenylalanine 3.0 31 1 G glycine 7.3 75 2 H histidine 1.4 14 1 I isoleucine 5.8 59 2 K lysine 4.9 50 2 L leucine 6.8 70 3 M methionine 1.8 18 1 N asparagine 4.3 44 2 P proline 6.6 68 3 Q glutamine 3.5 36 2 R arginine 4.9 50 2 S serine 10.2 105 4 T threonine 6.6 68 2 V valine 8.6 88 2 W tryptophan 1.9 19 1 Y tyrosine 3.4 35 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 contactin 5 isoform short CNTN5 0.983 contactin 5 isoform long CNTN4 0.557 contactin 4 isoform a precursor CNTN3 0.546 contactin 3 CNTN6 0.500 contactin 6 CNTN2 0.429 contactin 2 precursor CNTN1 0.429 contactin 1 isoform 2 precursor CNTN1 0.427 contactin 1 isoform 1 precursor CNTN4 0.348 contactin 4 isoform c precursor L1CAM 0.186 L1 cell adhesion molecule isoform 3 precursor [Homo... L1CAM 0.186 L1 cell adhesion molecule isoform 2 precursor L1CAM 0.186 L1 cell adhesion molecule isoform 1 precursor NFASC 0.169 neurofascin isoform 3 precursor NFASC 0.169 neurofascin isoform 4 precursor NRCAM 0.165 neuronal cell adhesion molecule isoform B precursor ... NFASC 0.165 neurofascin isoform 2 precursor NRCAM 0.163 neuronal cell adhesion molecule isoform A precursor ... CHL1 0.158 cell adhesion molecule with homology to L1CAM precur... NFASC 0.157 neurofascin isoform 1 precursor SDK2 0.123 sidekick 2 SDK1 0.122 sidekick 1 CNTN4 0.110 contactin 4 isoform b precursor NFASC 0.108 neurofascin isoform 6 precursor NFASC 0.107 neurofascin isoform 5 precursor DSCAM 0.105 Down syndrome cell adhesion molecule isoform CHD2-42... ROBO1 0.095 roundabout 1 isoform b ROBO1 0.095 roundabout 1 isoform a ROBO1 0.093 roundabout 1 isoform d ROBO1 0.093 roundabout 1 isoform c LOC642132 0.093 PREDICTED: similar to roundabout 1 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.