Guide to the Human Genome
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Name: IGSF9 Sequence: fasta or formatted (1179aa) NCBI GI: 205277425
Description:

immunoglobulin superfamily, member 9 isoform a

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [1163aa] immunoglobulin superfamily, member 9 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         97           2
 C cysteine            1.7         20           1
 D aspartate           3.7         44           2
 E glutamate           5.4         64           2
 F phenylalanine       2.7         32           2
 G glycine             8.7        102           2
 H histidine           1.8         21           2
 I isoleucine          2.3         27           2
 K lysine              2.0         23           1
 L leucine            11.4        134           2
 M methionine          0.7          8           1
 N asparagine          2.1         25           1
 P proline            12.4        146           3
 Q glutamine           4.1         48           1
 R arginine            7.0         82           4
 S serine              8.6        101           4
 T threonine           5.0         59           2
 V valine              8.5        100           2
 W tryptophan          1.8         21           1
 Y tyrosine            2.1         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   immunoglobulin superfamily, member 9 isoform a [Hom... 
IGSF9                 0.980   immunoglobulin superfamily, member 9 isoform b [Hom...
IGSF9B                0.308   immunoglobulin superfamily, member 9B 
ROBO2                 0.050   roundabout, axon guidance receptor, homolog 2 isofo...
ROBO2                 0.050   roundabout, axon guidance receptor, homolog 2 isofor...
HMCN1                 0.049   hemicentin 1 
ROBO3                 0.044   roundabout, axon guidance receptor, homolog 3 
SDK2                  0.043   sidekick 2 
HMCN2                 0.043   PREDICTED: hemicentin 2 
SDK1                  0.042   sidekick 1 
PXDN                  0.042   peroxidasin 
HMCN2                 0.042   PREDICTED: hemicentin 2 
HMCN2                 0.042   PREDICTED: hemicentin 2 
LOC100292387          0.042   PREDICTED: similar to hemicentin 2 
L1CAM                 0.041   L1 cell adhesion molecule isoform 3 precursor [Homo...
L1CAM                 0.041   L1 cell adhesion molecule isoform 2 precursor 
L1CAM                 0.041   L1 cell adhesion molecule isoform 1 precursor 
ROBO1                 0.041   roundabout 1 isoform b 
ROBO1                 0.041   roundabout 1 isoform a 
IGDCC4                0.041   immunoglobulin superfamily, DCC subclass, member 4 [...
NEO1                  0.041   neogenin homolog 1 
PRTG                  0.041   protogenin 
DSCAM                 0.041   Down syndrome cell adhesion molecule isoform CHD2-42...
IGDCC3                0.040   putative neuronal cell adhesion molecule 
ROBO1                 0.039   roundabout 1 isoform d 
ROBO1                 0.039   roundabout 1 isoform c 
LOC642132             0.039   PREDICTED: similar to roundabout 1 isoform 1 
LOC642132             0.039   PREDICTED: similar to roundabout 1 isoform 2 
HSPG2                 0.039   heparan sulfate proteoglycan 2 
PXDNL                 0.038   peroxidasin homolog-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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