Guide to the Human Genome
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Name: MTL5 Sequence: fasta or formatted (508aa) NCBI GI: 40806200
Description:

metallothionein-like 5, testis-specific isoform a

Referenced in:

Metallothioneins
Testes and Sperm

Other entries for this name:
alt prot [306aa] metallothionein-like 5, testis-specific isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         38           1
 C cysteine            6.1         31           2
 D aspartate           3.1         16           1
 E glutamate           8.7         44           2
 F phenylalanine       3.1         16           1
 G glycine             8.3         42           2
 H histidine           2.6         13           2
 I isoleucine          3.3         17           1
 K lysine              6.3         32           2
 L leucine            10.8         55           2
 M methionine          2.4         12           1
 N asparagine          5.1         26           2
 P proline             8.3         42           2
 Q glutamine           4.3         22           2
 R arginine            2.8         14           2
 S serine              7.5         38           2
 T threonine           3.3         17           3
 V valine              3.9         20           2
 W tryptophan          0.4          2           1
 Y tyrosine            2.2         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   metallothionein-like 5, testis-specific isoform a [H... 
MTL5                  0.574   metallothionein-like 5, testis-specific isoform b [H...
LIN54                 0.215   lin-54 homolog isoform b 
LIN54                 0.215   lin-54 homolog isoform b 
LIN54                 0.215   lin-54 homolog isoform a 
MSL2                  0.012   ring finger protein 184 isoform 2 
MSL2                  0.012   ring finger protein 184 isoform 1 
ANKHD1                0.008   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.008   ANKHD1-EIF4EBP3 protein 
USP22                 0.008   ubiquitin thiolesterase 22 
ZNF518A               0.008   zinc finger protein 518 
STAC3                 0.007   SH3 and cysteine rich domain 3 
MEGF8                 0.006   multiple EGF-like-domains 8 
RBM42                 0.006   RNA binding motif protein 42 
STAB2                 0.006   stabilin 2 precursor 
TUFT1                 0.005   tuftelin 1 isoform 2 
TUFT1                 0.005   tuftelin 1 isoform 1 
ZAN                   0.005   zonadhesin isoform 3 
ZAN                   0.005   zonadhesin isoform 6 
LAMA5                 0.005   laminin alpha 5 
GTF2H2C               0.005   general transcription factor IIH, polypeptide 2C [H...
LOC730236             0.005   PREDICTED: hypothetical protein 
LOC730236             0.005   PREDICTED: hypothetical protein 
LOC730236             0.005   PREDICTED: hypothetical protein 
GTF2H2D               0.005   general transcription factor IIH, polypeptide 2D [H...
ITGB2                 0.004   integrin, beta 2 precursor 
ITGB2                 0.004   integrin, beta 2 precursor 
LOC729815             0.004   PREDICTED: hypothetical protein 
FOXN3                 0.004   checkpoint suppressor 1 isoform 1 
ELK3                  0.004   ELK3 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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