Guide to the Human Genome
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Name: MTL5 Sequence: fasta or formatted (306aa) NCBI GI: 89111119
Description:

metallothionein-like 5, testis-specific isoform b

Referenced in:

Metallothioneins
Testes and Sperm

Other entries for this name:
alt prot [508aa] metallothionein-like 5, testis-specific isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         28           1
 C cysteine            2.6          8           2
 D aspartate           3.9         12           1
 E glutamate           8.2         25           2
 F phenylalanine       2.6          8           1
 G glycine             8.8         27           2
 H histidine           2.0          6           1
 I isoleucine          2.6          8           1
 K lysine              5.2         16           2
 L leucine            13.1         40           2
 M methionine          2.0          6           1
 N asparagine          3.9         12           2
 P proline            10.8         33           2
 Q glutamine           4.6         14           2
 R arginine            1.6          5           1
 S serine              7.5         23           2
 T threonine           3.9         12           3
 V valine              5.6         17           2
 W tryptophan          0.3          1           1
 Y tyrosine            1.6          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   metallothionein-like 5, testis-specific isoform b [H... 
MTL5                  1.000   metallothionein-like 5, testis-specific isoform a [H...
ANKHD1                0.013   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.013   ANKHD1-EIF4EBP3 protein 
ZAN                   0.008   zonadhesin isoform 3 
ZAN                   0.008   zonadhesin isoform 6 
LOC730236             0.008   PREDICTED: hypothetical protein 
LOC730236             0.008   PREDICTED: hypothetical protein 
LOC730236             0.008   PREDICTED: hypothetical protein 
FOXN3                 0.007   checkpoint suppressor 1 isoform 1 
ELK3                  0.007   ELK3 protein 
COPE                  0.007   epsilon subunit of coatomer protein complex isoform ...
COPE                  0.007   epsilon subunit of coatomer protein complex isoform ...
MYT1                  0.007   myelin transcription factor 1 
LCE5A                 0.007   late cornified envelope 5A 
SOX7                  0.005   SRY-box 7 
FAM22E                0.005   PREDICTED: hypothetical protein isoform 1 
FAM22E                0.005   PREDICTED: hypothetical protein 
IRF2BP1               0.005   interferon regulatory factor 2 binding protein 1 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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