Guide to the Human Genome
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Name: ANKHD1-EIF4EBP3 Sequence: fasta or formatted (2617aa) NCBI GI: 37620163
Description:

ANKHD1-EIF4EBP3 protein

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4        245           4
 C cysteine            1.4         36           2
 D aspartate           5.0        131           2
 E glutamate           6.3        164           3
 F phenylalanine       2.3         61           1
 G glycine             7.7        202           5
 H histidine           2.9         75           1
 I isoleucine          3.4         88           2
 K lysine              4.9        127           4
 L leucine             9.2        240           4
 M methionine          1.9         49           1
 N asparagine          4.8        126           2
 P proline             7.3        190           4
 Q glutamine           5.0        132           3
 R arginine            3.7         97           2
 S serine             10.2        267           4
 T threonine           7.0        184           5
 V valine              6.5        170           2
 W tryptophan          0.3          8           1
 Y tyrosine            1.0         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ANKHD1-EIF4EBP3 protein 
ANKHD1                0.963   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKRD17               0.545   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.285   ankyrin repeat domain protein 17 isoform b 
ANKHD1                0.221   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.216   ankyrin repeat and KH domain containing 1 isoform 2 ...
ANKRD50               0.045   ankyrin repeat domain 50 
ANK2                  0.041   ankyrin 2 isoform 3 
ANK2                  0.041   ankyrin 2 isoform 2 
ANK2                  0.041   ankyrin 2 isoform 1 
ANK1                  0.039   ankyrin 1 isoform 9 
ANK1                  0.039   ankyrin 1 isoform 1 
ANK1                  0.039   ankyrin 1 isoform 3 
ANK1                  0.039   ankyrin 1 isoform 2 
ANK1                  0.039   ankyrin 1 isoform 4 
ANK3                  0.039   ankyrin 3 isoform 1 
KIDINS220             0.031   kinase D-interacting substrate of 220 kDa 
ANKRD44               0.030   ankyrin repeat domain 44 
ANKRD52               0.028   ankyrin repeat domain 52 
ANKRD28               0.028   ankyrin repeat domain 28 
TNKS                  0.028   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
TANC2                 0.027   tetratricopeptide repeat, ankyrin repeat and coiled...
TRPA1                 0.027   ankyrin-like protein 1 
TNKS2                 0.026   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANKK1                 0.026   ankyrin repeat and kinase domain containing 1 
RIPK4                 0.026   ankyrin repeat domain 3 
TANC1                 0.024   tetratricopeptide repeat, ankyrin repeat and coiled...
TANC1                 0.024   tetratricopeptide repeat, ankyrin repeat and coiled...
ANKS6                 0.024   ankyrin repeat and sterile alpha motif domain contai...
ASB2                  0.022   ankyrin repeat and SOCS box-containing protein 2 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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