Guide to the Human Genome
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Name: USP22 Sequence: fasta or formatted (525aa) NCBI GI: 150010639
Description:

ubiquitin thiolesterase 22

Referenced in:

Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         27           2
 C cysteine            5.0         26           1
 D aspartate           5.0         26           2
 E glutamate           5.5         29           2
 F phenylalanine       5.0         26           2
 G glycine             5.9         31           2
 H histidine           5.7         30           1
 I isoleucine          5.0         26           2
 K lysine              7.0         37           2
 L leucine             9.1         48           2
 M methionine          2.3         12           1
 N asparagine          4.0         21           2
 P proline             4.0         21           2
 Q glutamine           4.2         22           2
 R arginine            4.8         25           2
 S serine              7.8         41           2
 T threonine           5.5         29           3
 V valine              4.4         23           2
 W tryptophan          1.5          8           1
 Y tyrosine            3.2         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin thiolesterase 22 
USP51                 0.676   ubiquitin specific protease 51 
USP27X                0.652   X-linked ubiquitin thioesterase 27 
USP3                  0.154   ubiquitin thiolesterase 3 
USP2                  0.136   ubiquitin specific peptidase 2 isoform a 
USP8                  0.132   ubiquitin specific peptidase 8 
USP8                  0.132   ubiquitin specific peptidase 8 
USP8                  0.132   ubiquitin specific peptidase 8 
USP2                  0.132   ubiquitin specific peptidase 2 isoform b 
LOC100287238          0.123   PREDICTED: hypothetical protein XP_002342474 
USP42                 0.121   ubiquitin specific peptidase 42 
LOC728379             0.120   PREDICTED: similar to deubiquitinating enzyme DUB1 ...
DUB3                  0.120   deubiquitinating enzyme 3 
LOC100287327          0.120   PREDICTED: hypothetical protein XP_002342475 
LOC728373             0.119   PREDICTED: similar to deubiquitinating enzyme DUB1 ...
LOC100287513          0.119   PREDICTED: hypothetical protein XP_002342480 
LOC100287404          0.118   PREDICTED: hypothetical protein XP_002342477 
LOC100287364          0.118   PREDICTED: hypothetical protein XP_002342476 
LOC100287178          0.118   PREDICTED: hypothetical protein XP_002342472 
LOC100287144          0.118   PREDICTED: hypothetical protein XP_002342471 
LOC728419             0.117   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728405             0.117   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728400             0.117   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728393             0.117   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
USP17L5               0.117   PREDICTED: Ubiquitin carboxyl-terminal hydrolase 17...
LOC728379             0.117   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728373             0.117   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728369             0.117   PREDICTED: similar to deubiquitinating enzyme 3 [Ho...
LOC100287478          0.117   PREDICTED: hypothetical protein XP_002342479 
LOC100287441          0.117   PREDICTED: hypothetical protein XP_002342478 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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