Guide to the Human Genome
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Name: ZAN Sequence: fasta or formatted (2812aa) NCBI GI: 16554449
Description:

zonadhesin isoform 3

Referenced in:

Mucins
Additional Genes in Development
Testes and Sperm

Other entries for this name:
alt prot [2721aa] zonadhesin isoform 6
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2        145           2
 C cysteine            5.7        159           1
 D aspartate           3.8        107           2
 E glutamate           6.7        187           3
 F phenylalanine       2.9         81           2
 G glycine             7.8        220           3
 H histidine           2.2         62           2
 I isoleucine          4.1        116           2
 K lysine              4.6        130           2
 L leucine             7.9        221           4
 M methionine          1.6         44           2
 N asparagine          3.2         90           3
 P proline             9.4        265           3
 Q glutamine           4.2        119           2
 R arginine            4.1        115           2
 S serine              8.6        243           3
 T threonine           8.5        240           4
 V valine              5.7        161           4
 W tryptophan          1.4         38           1
 Y tyrosine            2.5         69           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zonadhesin isoform 3 
ZAN                   0.922   zonadhesin isoform 6 
FCGBP                 0.144   Fc fragment of IgG binding protein 
LOC100290309          0.144   PREDICTED: hypothetical protein XP_002348012 
LOC100133944          0.112   PREDICTED: similar to Fc fragment of IgG binding pr...
TECTA                 0.104   tectorin alpha precursor 
LOC100293676          0.090   PREDICTED: similar to Fc fragment of IgG binding pr...
LOC100132635          0.058   PREDICTED: similar to mucin 5, partial 
C12orf64              0.051   PREDICTED: chromosome 12 open reading frame 64 [Hom...
C12orf64              0.051   PREDICTED: chromosome 12 open reading frame 64 [Hom...
C12orf64              0.051   PREDICTED: hypothetical protein LOC283310 
MUC2                  0.046   mucin 2 precursor 
LOC100293643          0.046   PREDICTED: similar to Fc fragment of IgG binding pr...
VWF                   0.045   von Willebrand factor preproprotein 
SSPO                  0.044   SCO-spondin 
MUC5AC                0.039   mucin 5AC 
MUC5B                 0.039   mucin 5, subtype B, tracheobronchial 
OTOG                  0.037   PREDICTED: otogelin isoform 1 
OTOG                  0.037   PREDICTED: otogelin isoform 2 
OTOG                  0.037   PREDICTED: otogelin isoform 2 
OTOG                  0.037   PREDICTED: otogelin isoform 1 
OTOG                  0.037   PREDICTED: otogelin isoform 2 
OTOG                  0.037   PREDICTED: otogelin isoform 1 
KCP                   0.035   cysteine rich BMP regulator 2 isoform 1 
LOC100294420          0.032   PREDICTED: similar to mucin 2 
MUC6                  0.031   mucin 6, gastric 
POLR2A                0.029   DNA-directed RNA polymerase II A 
PRG4                  0.028   proteoglycan 4 isoform D 
PRG4                  0.028   proteoglycan 4 isoform C 
PRG4                  0.028   proteoglycan 4 isoform B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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